Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1144 ATGCGTTGGTCTTCCAGCTTCTTTCACACAGCCTCTAGGGTTTTCAATGAGTATCCATCATGGTCCAAGTCTGTTCTTGTTTGCACTGTCATCAGTGGAGGAGGAGCAGTGGCATTTTGCGATGTGAAACCAGAATCTGGCAATGAAAGTCCAAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTCTGAAAAATATGAAAAGTACCTCCTACGATATTCATGTGGTTTCACCACGTAACTATTTTGCTTTCACTCCATTGCTACCAAGTGTAACATGTGGTACAGTGGAAGCAAGGAGCGTCGTTGAACCCATTCGCAGTATCACCCGCAAGAGCGGTGTAAATATTCATTTCAGTGAAGCTGAATGCTACAAGATCGACCAAAAGAACAACAAAGTGTTTTGTCGTGCTGTTGGTATTAAGGACAAAAAGTCTGGTGTCCAAGAAGAATTTTCAATTGATTATGATTACCTGGTAATAGGTATGGGAGGCCGTTCTAATACCTTCAACACACCTGGTGTTGAGGAACATGCCCATTTCCTGAAGGAAGTGGATGAAGCTCTAAAAATCCGCCGGAAAGTGGTTGAACTTTTTGAAAGAGCTAGCATTCCTTCTTTACCTGTGGAAGAGAAGAAAAGGCTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAATTTTCTGCTGAGCTTCATGACTTTGTACATGAGGATATGGCTCTTTTATATCCGGAACTTAAAGAATACGTGAAGATTACTCTCTTGGAGGCAGGCGATCATATCTTAAACATGTTTGATAAGAGAATTACTGAATTTGCTGAATTAAAGTTTGCCAGAGATGGCATTAATGTGAAGTTGGGATCTATGGTTGTGAACGTTGGTGAAAACGAAATCACTGCCAAAGAAAGGTCAACTGGTCGAGTTGTTTCCATACCTCACGGAATGGTAGTTTGGTCAACTGGTATCGGTGCTCGCCCTGAACTAGTTGAATTTATGAAACAGCTTGGCCAGATTAACAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTTGAAGGATCTGACAACATCTATGCTCTTGGTGATTGTGCCACTATAAATCAGCGTAAAGTTATGGAAGATATAGCCGTGATATTTAGCAAGGCTGACAAGGAAAGTTCTGGAAAATTAGTTCTTCAAGAATTCAAAAACGTTGTTGGTGACATTATTGAAAGGTACCCTCAAGTGGACATTTATTTAAAGAAGAACCAAATGAAAGACATGGCCAGCTTGCTAAAGAAATCTCAAGAAAGCGGCATTACAGTGGACATTGAATATTTCAAACAAGCCCTTTCCAAAGTAGACTCTCAGATGAAAAATCTTCCTGCCACAGCTCAGGTAGCTGCACAGCAAGGAGTGTATCTTGCAGACTGTTTCAATCGCATGGAGTTGTGTGAGAGGTATCCTGAAGGCCCTATCAGGTTCAGAGGAGTTGGTCGCCATCGATTCCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCACTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCAGAGCACCCAGTGGCTCTGGTATTCAGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGGTTTTTGGTGGTTGGTGACTGGGGAAGGCGATTCATGTTTGGTAGGGATTCAAGTCAAATCTAA 1728 0.4282 MRWSSSFFHTASRVFNEYPSWSKSVLVCTVISGGGAVAFCDVKPESGNESPKKKVVVLGTGWAGTSFLKNMKSTSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITRKSGVNIHFSEAECYKIDQKNNKVFCRAVGIKDKKSGVQEEFSIDYDYLVIGMGGRSNTFNTPGVEEHAHFLKEVDEALKIRRKVVELFERASIPSLPVEEKKRLLSFVVVGGGPTGVEFSAELHDFVHEDMALLYPELKEYVKITLLEAGDHILNMFDKRITEFAELKFARDGINVKLGSMVVNVGENEITAKERSTGRVVSIPHGMVVWSTGIGARPELVEFMKQLGQINRRALVTDEWLRVEGSDNIYALGDCATINQRKVMEDIAVIFSKADKESSGKLVLQEFKNVVGDIIERYPQVDIYLKKNQMKDMASLLKKSQESGITVDIEYFKQALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMELCERYPEGPIRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFMFGRDSSQI* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1144 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Pvu11g1144 575 PANTHER NAD(P)H DEHYDROGENASE B2 71 575 - -
Pvu11g1144 575 SUPERFAMILY FAD/NAD(P)-binding domain 214 374 IPR036188 -
Pvu11g1144 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 380 IPR023753 GO:0016491
Pvu11g1144 575 PANTHER NADH DEHYDROGENASE 71 575 IPR045024 GO:0003954|GO:0006116
Pvu11g1144 575 Gene3D - 44 391 - -
Pvu11g1144 575 Gene3D - 420 574 - -
Pvu11g1144 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Pvu11g1144 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Pvu11g1144 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Pvu11g1144 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Pvu11g1144 575 SUPERFAMILY EF-hand 371 461 IPR011992 -
Pvu11g1144 575 SUPERFAMILY FAD/NAD(P)-binding domain 52 273 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1144 Pvu-Chr11 14436083 14440465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1144 6 575 Chloroplast and Mitochondria Gene Families AT4G21490 65.921 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1144 K03885 - gmx:100820044 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1144 11 14436083 14440465 Pvu11g1144 11 14436083 14440465 ECH