Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1137 ATGGGAAGAGCTCCTTGCTGTGATAAGGATGGACTCAAGAAGGGTCCATGGACACCAGAAGAAGACCTTAAACTCATCAACTACATTCAGACTCATGGACCAGGCAATTGGAGATCCCTACCTAAAAGTGCTGGTCTACAAAGGTGTGGCAAGAGTTGCCGCCTTCGATGGACAAATTACCTTAGACCCGATATTAAGAGAGGAAGATTCTCCTTAGAAGAAGAAGATACGATTATTCAGTTGCACAGTATCTTGGGAAACAAATGGTCATCTATAGCAGCTAGGTTGCCAGGAAGAACTGACAATGAAATAAAGAACTATTGGAACACTCACATTAGGAAGAGGCTTCTTCGTATGGGAATTGATCCGGTTACACACGCCCCACGCCTTGACCTTCTTGATATGTCATCTATTTTAAGGTCAGTGTTGAACCCCTCCCTTAACATGCAAGGCTTCTTAGGAGGAGCCCAAGTTTTGATGAACCAAGGGTTGTTAAACCTTGCTGCTACAGCCTCTCTTCTAGAAAATCAAAATTTGGCTTCAAACAATTATGTAAACCAAGTTGCTCAACCACTAGACATAACTCAGCTTCAAATGCCTACTCATACGAATACAACCAGTGTGGAAGGATTCTCTGGCACCATGGAAAACTTTAGCTGCTCAAATTCTTCTTCTGCTGCTGATGAGAACCTTGTTTTGCAACCAAACCAAGTTGATTTGTTAGGTCACCATGTTTTGGTGCATTCCCTGAAAAATGCATACCAGAACAAGGGGTATGACTTGGTTATTCCTACGCCTGAGTCAAGTCCAAACCAGTTGAATGCATCATCCAACTCTTTGAGAAGTGGCAATGAGGAAGAGAAGAATAGCTTTTGCAGTGACTTGTTCGAATTCGAAATTCCAGAGGGCTTGGACATTGCTGATATTTTTTGTAATGTCCCACAGACTAATTATTGA 957 0.4232 MGRAPCCDKDGLKKGPWTPEEDLKLINYIQTHGPGNWRSLPKSAGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEDTIIQLHSILGNKWSSIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSILRSVLNPSLNMQGFLGGAQVLMNQGLLNLAATASLLENQNLASNNYVNQVAQPLDITQLQMPTHTNTTSVEGFSGTMENFSCSNSSSAADENLVLQPNQVDLLGHHVLVHSLKNAYQNKGYDLVIPTPESSPNQLNASSNSLRSGNEEEKNSFCSDLFEFEIPEGLDIADIFCNVPQTNY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1137 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu11g1137 318 CDD SANT 69 112 IPR001005 -
Pvu11g1137 318 CDD SANT 16 61 IPR001005 -
Pvu11g1137 318 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pvu11g1137 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu11g1137 318 PANTHER TRANSCRIPTION FACTOR MYB41 1 305 - -
Pvu11g1137 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu11g1137 318 MobiDBLite consensus disorder prediction 265 285 - -
Pvu11g1137 318 Gene3D - 69 116 - -
Pvu11g1137 318 MobiDBLite consensus disorder prediction 262 285 - -
Pvu11g1137 318 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 305 - -
Pvu11g1137 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu11g1137 318 SMART sant 66 114 IPR001005 -
Pvu11g1137 318 SMART sant 13 63 IPR001005 -
Pvu11g1137 318 Gene3D - 13 66 - -
Pvu11g1137 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu11g1137 318 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1137 Pvu-Chr11 14237917 14239220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1137 1 306 MYB Transcription Factor Family AT4G21440 46.479 5.19e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu11g1137 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1137 K09422 - gmx:100817731 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1130 5 31863833 31865148 Pvu11g1137 11 14237917 14239220 PCT