Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1131 ATGTGGAAAAAGTTGCAGACTTCGATGGATGAATTACCTGCGCCCAAATCTAAAACGAGGGAACTATACCCCCAAGGAAGACCAAATCTCACGGATTTGCATCAAAAGCATGGAAACAAATGGTCTCTGATTGCTGAAAATCTACACGGAAGAACAGACAATGAGATAAAGAACTATTGGCACAGCCACCTAAAGAAGTTCCAAAACAGCAACATGAACACCTCTTGTGATGAAGATTTGAAGTCCATTGGATGCAAAGATTTTGAAATGGCAACGAACGAGGCTCTTGGTGTTGAATCTCTCCACATTTTGGAGAGCTCAGTGTCAATTTCCTCAGAAACTTCCTACACCGACCACAATTCCCCTTCACTTTCATCCTCTTCAAGTCACACGGAATCAACCATGAACTTGTGCAAGGAAGAAGAAAGCGTTGCTTCATTGGAAACATTGGATTCAGGGTTTAGTAGCAGTTTCTGGACCGAACCCTTCATTTCAGAAAACGCACTTGATCAAGATTATTTTCCCATTTCCTCTTACATGTCAGAACCATTTTACTTGTGGTAG 564 0.4167 MWKKLQTSMDELPAPKSKTRELYPQGRPNLTDLHQKHGNKWSLIAENLHGRTDNEIKNYWHSHLKKFQNSNMNTSCDEDLKSIGCKDFEMATNEALGVESLHILESSVSISSETSYTDHNSPSLSSSSSHTESTMNLCKEEESVASLETLDSGFSSSFWTEPFISENALDQDYFPISSYMSEPFYLW* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1131 187 Pfam Myb-like DNA-binding domain 30 64 IPR001005 -
Pvu11g1131 187 MobiDBLite consensus disorder prediction 1 25 - -
Pvu11g1131 187 PANTHER MYB TRANSCRIPTION FACTOR 30 180 - -
Pvu11g1131 187 ProSiteProfiles Myb-like domain profile. 30 64 IPR001005 -
Pvu11g1131 187 SMART sant 18 66 IPR001005 -
Pvu11g1131 187 CDD SANT 30 64 IPR001005 -
Pvu11g1131 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 68 IPR017930 -
Pvu11g1131 187 SUPERFAMILY Homeodomain-like 30 77 IPR009057 -
Pvu11g1131 187 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 30 180 - -
Pvu11g1131 187 MobiDBLite consensus disorder prediction 114 138 - -
Pvu11g1131 187 Gene3D - 27 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1131 Pvu-Chr11 14091079 14092582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1131 15 83 MYB Transcription Factor Family AT2G31180 47.143 6.45e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu11g1131 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1131 K09422 - gmx:100781032 204.527