Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1130 ATGGTAAGAACTCCTTCCTATGACAAAAATGGATTGAAGAAAGGTGCATGGAGTAGAGAAGAAGATGATAAGTTAAGAGCTTATGTTCAGATATATGGTCACTCAAATTGGCGTCAACTCCCCAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGTTGGTTGAATTACTTGAGACCAAATCTAAAACACGGGAACTACACCACAGAGGAAGAAGAAACAATCATCAAATTACACCAAGAATTTGGAAATAGATGGTCCTTGATTGCTGAAAAACTTCCTGGAAGAACCGACAATGAGGTAAAGAACTATTGGCATAGCCACCTAAAAAAGAGCTTGAAGAGCAATGAAATGACACCATCTGAGTTGAAGTCAAAGCCAAATGAGAGTTTTGAATACGAAAAATCTGAAAACCTAGGTGCCAATAGTGGTGATATCTTCCCTCATATTTTAGAAAGTTCATTGGCCAGAGACAACTATTTGGCTACCACCAATGCTGAAGAAGATGGTGTTCCTCCGTTAGTATCACACAAAGAATTCAGCGGCGATTTTTGGTCTGAGCCATTCCTCGTAGAAGATAGTCTTGATACTTTTAAAGATGAGATTTGGAGTGGTAAAGGAATGGCACTGTTACTTCCAAACTTCGATGGCGCATATTTGTTTTAG 675 0.3941 MVRTPSYDKNGLKKGAWSREEDDKLRAYVQIYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTTEEEETIIKLHQEFGNRWSLIAEKLPGRTDNEVKNYWHSHLKKSLKSNEMTPSELKSKPNESFEYEKSENLGANSGDIFPHILESSLARDNYLATTNAEEDGVPPLVSHKEFSGDFWSEPFLVEDSLDTFKDEIWSGKGMALLLPNFDGAYLF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1130 224 CDD SANT 69 112 IPR001005 -
Pvu11g1130 224 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu11g1130 224 CDD SANT 16 61 IPR001005 -
Pvu11g1130 224 Gene3D - 69 141 - -
Pvu11g1130 224 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu11g1130 224 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu11g1130 224 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Pvu11g1130 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu11g1130 224 PANTHER MYB-RELATED PROTEIN 308-LIKE 1 200 - -
Pvu11g1130 224 Gene3D - 6 67 - -
Pvu11g1130 224 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 200 - -
Pvu11g1130 224 MobiDBLite consensus disorder prediction 119 138 - -
Pvu11g1130 224 SMART sant 13 63 IPR001005 -
Pvu11g1130 224 SMART sant 66 114 IPR001005 -
Pvu11g1130 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu11g1130 224 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1130 Pvu-Chr11 14035692 14036992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1130 1 197 MYB Transcription Factor Family AT2G31180 46.040 3.04e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu11g1130 Myb_DNA-binding 2.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1130 K09422 - gmx:100776043 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1136 5 32024860 32026313 Pvu11g1130 11 14035692 14036992 PCT