Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1123 ATGTGGAACAAGAAACCACCCTTGTTATGGCTTTCTCTCCTCATCACATACTTCTTCTCTTTCCACACCTACATATCACTTGCAGCTTTGACCACCATCTCAGCAAATCAATCTCTCTCTGGAGATCAAACTCTTGTCTCCACAGAGGGACAATTTGAATTGGGTTTCTTCTCCACAGGTAACAACTCTAATTACTATATAGGCATGTGGTACAGAAAGATATCTAAAAAGACTTATGTTTGGGTAGCAAATAGAGACACCCCAGTTTCTGATAAGAATTCTGCTAAATTAACAATATTGGATGGTAATTTAGTGGTCTTAAACCAGTTCCAAAATATAGTTTGGTCAACGAATTTGAGTTCTTCTAGCTCAGGTTCTGTGGTAGCCGTGCTTCTAGATTCTGGGAATCTTATATTAAGCAATAGGCCTAATGCATCAGCAACTGATGCTATGTGGCAGAGTTTTGATCACCCCACAGACACGTGGCTTCCCGGTGGCAAGATAAGTTTGAACAACAAAACAAAGAAACCACAGTATCTCACTTCATGGAAGAATACTGAAGATCCTGCAACGGGTATGTTCTCTCTTGAACTAGACCCTGAAGGAAGCACTGCATATTTGATTCGTTGGAATAGAACTGAGCAGTATTGGTCCAGTGGTGCTTGGAATGGACACATTTTCAGCTTGGTTCCTGAGATGAGACTAAACTACATCTACAATTTCACCTTTGTGTCTAATGAGAACGAGAGCTACTTCACTTACTCCTTGTATAACAACTCTATTATATCTCGCTTTTTTATGGATGTCTCGGGGCAGATTAAGCAACTGACGTGGCTGGATAATGCTCAACAGTGGAATCTGTTCTGGTCTCAGCCTAGGCAACAGTGTGAGGTCTATGCCTTCTGTGGTGGATTTGGGAGCTGCACTGAGAATGCCATGCCATATTGTAATTGTTTGACTGGGTATGAGCCAAAGTCACAATCTGATTGGAATCTTACGGATTACTCAGGAGGGTGTGTGAGAAAGACGGAGCTTCGATGTGACCCTCCAAATTCCTCTAGCAAGGACAATGACAGGTTCCTTCCAATTCCCAACATGAATTTGCCTAATCATTCACAATCCATAGGAGCTGGGGATGTTGGGGAATGTGAATCAAGATGCTTGAGTAACTGTTCTTGTACTGCATATGCTTATGACAATAATGGTTGCTCAATTTGGTATGGTGATCTCTTGAACCTGCAACAGCTTACTCAAGATGACAGCAGTGGGCAGACTTTGTTTCTCAAACTTGCAGCGTCCGAGTTTCATGATTCTAAAAGCAATAAAGGGACAGTCATTGGTGCTGTTGCTGGAGCTGTTGGTGCCGTGGTGGTTCTTCTAATTGTCTTTGTTTTTGTGATTCTCAGGCGTAGAAAGAGACATGTTGGGACAGGAACATCCGTGGAGGGCTCATTGGTGGCATTTGGGTATAGGGATTTGCAAAATGCAACGAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGTTTTGGCTCTGTCTTCAAAGGAACATTGCCTGATTCTAGTGTCATTGCAGTTAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACAATTGGGACAGTCCAGCATGTCAATCTTGTAAGGCTTCGCGGGTTCTGCTCTGAAGGTACTAAGAAACTTCTGGTTTATGATTACATGCCAAATGGTTCATTGGATTCCAAAATATTTCAAGAAGATAGATCCAAGGTGTTGGATTGGAAAGTGAGGTACCAAATTGCTCTTGGAACAGCGAGGGGGTTGACTTATCTTCACGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTTGATGCTGATTTTGTTCCAAAGGTGGCAGACTTTGGCCTTGCAAAGCTGGTTGGAAGGGACTTCAGCAGGGTCCTCACTACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATATCAGGTGTGGCTATCACTGCCAAAGCAGATGTCTACAGCTATGGAATGATGCTTTTTGAGTTGGTGTCAGGTAGGAGGAACTCTGAGGCATCGGAAGATGGCCAAGTGAGGTTCTTCCCTACTTTTGCTGCAAACATGGTCCACCAAGAAGGGAATGTGCTTAGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTCAATAGAGTCATCAAAATTGCTTCATGGTGTGTCCAGGATGATGAATCTCACAGGCCTTCCATGGGTCAGGTGGTTCAAATCCTTGAAGGTTTCTTGGAAGTGACTTTGCCTCCAATTCCAAGGACCCTCCAAGCCTTTGTTGACAACCATGAGAGCATAGTTTTCTTCACTGACTCCAGCTCCACACAGAGTTCACAGGTAAAGAGTAATACCTCAAGTGCCTCCTCTCAAACCAAGACCAAGACCAACACCACATCCAATACTTCCTAG 2490 0.4382 MWNKKPPLLWLSLLITYFFSFHTYISLAALTTISANQSLSGDQTLVSTEGQFELGFFSTGNNSNYYIGMWYRKISKKTYVWVANRDTPVSDKNSAKLTILDGNLVVLNQFQNIVWSTNLSSSSSGSVVAVLLDSGNLILSNRPNASATDAMWQSFDHPTDTWLPGGKISLNNKTKKPQYLTSWKNTEDPATGMFSLELDPEGSTAYLIRWNRTEQYWSSGAWNGHIFSLVPEMRLNYIYNFTFVSNENESYFTYSLYNNSIISRFFMDVSGQIKQLTWLDNAQQWNLFWSQPRQQCEVYAFCGGFGSCTENAMPYCNCLTGYEPKSQSDWNLTDYSGGCVRKTELRCDPPNSSSKDNDRFLPIPNMNLPNHSQSIGAGDVGECESRCLSNCSCTAYAYDNNGCSIWYGDLLNLQQLTQDDSSGQTLFLKLAASEFHDSKSNKGTVIGAVAGAVGAVVVLLIVFVFVILRRRKRHVGTGTSVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNGSLDSKIFQEDRSKVLDWKVRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSEASEDGQVRFFPTFAANMVHQEGNVLSLLDPRLEGNADIEEVNRVIKIASWCVQDDESHRPSMGQVVQILEGFLEVTLPPIPRTLQAFVDNHESIVFFTDSSSTQSSQVKSNTSSASSQTKTKTNTTSNTS* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1123 829 Pfam Protein kinase domain 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1123 829 CDD B_lectin 36 158 IPR001480 -
Pvu11g1123 829 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Pvu11g1123 829 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 8 798 - -
Pvu11g1123 829 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 798 - -
Pvu11g1123 829 SMART blect_4 36 158 IPR001480 -
Pvu11g1123 829 SMART ntp_6 355 430 IPR003609 -
Pvu11g1123 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Pvu11g1123 829 SMART serkin_6 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1123 829 CDD STKc_IRAK 504 771 - -
Pvu11g1123 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 223 IPR036426 -
Pvu11g1123 829 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Pvu11g1123 829 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Pvu11g1123 829 CDD PAN_AP_plant 343 431 - -
Pvu11g1123 829 SUPERFAMILY Protein kinase-like (PK-like) 484 805 IPR011009 -
Pvu11g1123 829 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Pvu11g1123 829 PIRSF SRK 2 824 IPR024171 GO:0004674
Pvu11g1123 829 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1123 829 MobiDBLite consensus disorder prediction 803 829 - -
Pvu11g1123 829 Pfam PAN-like domain 354 412 IPR003609 -
Pvu11g1123 829 Gene3D - 25 155 IPR036426 -
Pvu11g1123 829 Gene3D Phosphorylase Kinase; domain 1 464 572 - -
Pvu11g1123 829 Pfam D-mannose binding lectin 78 184 IPR001480 -
Pvu11g1123 829 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1123 Pvu-Chr11 13303182 13306159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1123 480 778 Receptor kinase-like Gene Family AT5G20050 44.762 8.27e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu11g1123 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1123 - - gmx:100782119 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1143 5 32394261 32396765 Pvu11g1123 11 13303182 13306159 PCT