Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1119 ATGGTAAACATCAAGAGAGACACCAGAAGGATAGTTATCCTTAACTGGTCCTCCAGTCACATGCTGTCTACCTTCCTCTTCTGCGCCTTGTTTATCACTTTTAGTTTTAAGCATTGCTCAGCCACAGATGCTATAACCATTAACAACTTCTTGCAAGATTGGGGAGGGGATACTCTTATTTCAAAAGGAGGAAAGTTTGAGCTAGGATTTTTCACTCCTAATGGCAGTTCTAGTGGAAGAAGATATGTGGGAATATGGTACTACAAGTTGACTCCTCTAACAGTTGTGTGGGTTGCTAACAGAGACAAACCACTTCTAGATTCTTGGGGTGCTTTTGGCATTGGAGAAGATGGGAATCTAAAGCTTTTGGACAGAAGTGGGAAAGCCTACTGGGGCACAAACCTTGAAGGATCAGCTTCACCACATAGAACAGTGAAGATAATGGACAGTGGGAACCTTATTGTTAGTGATGAAGTTGAAGAGCAAGGGGATCATCAAGTTAAGATTCTGTGGCAGAGTTTTGCTAATCCAACAGATACATTCCTTCCTGGAATGAAAATGGATGGTAATTTAGCACTAACATCATGGAGAAGTTATGAAGACCCTGCACCAGGGAACTTCACTTTTGTGCATTGTCAAGGGGAGAACCAGTACGTCATATGGAAGAGGTCCATCAAGTATTGGAAAAGCAGTGTTTCAAATAAGTTTTCTGGAAGTGATGAGATGTCTCCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAGTATCCCCAAACGACACTGTTCCCTTTCTCACTTCAGAACTTTATAGTGACTCAAGGTTGGTGATGACTCACTGGGGTCAACTTAAGTACATGAAGATGGATTCAGAGAAAGTGTGGTTGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCTTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGACTCCATGTGCAAGTGTTTGCCTGGGTACAAGCCTAATTCTATTAAGAGTTGGAATGGTGGAGACTTTTCAGGTGGATGCAGCAGGAAAACAAATGTCTGCAGTGGGGATGCTGAGAGAGCTACATTTTTGAGTTTGAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCCAAGAATGAAGAGGAATGCAAATCAGAGTGCCTCAACAATTGCCAGTGCTATGCATATTCATATAAAGGCACTGAAAAGGATACTGTTTGCTGGATTTGGTATGAGGACTTGAACAATCTTGAAGAAGAGTACGAGGATGGGTGTGACCTGCATGTTCGCGTGGCATTTTCTGATATAGAATCCACTGGGAACAGTTGTGGAACTTGTGGTACAAATTCCATTCCATATCCCCTAAGCACAGGACCAAGTTGTGGTGACCCCATGTACTTCAGTTTTCAATGCAACAATTCCTCTGGTGAGCTTGATTTTAAAACTCCTGGGGGAACCTATCAAGTGATTAGCATAAACCCAGACACACGGAAATTCTTGATCCACAGAAAAGATGTACTTAACTGTGATCAGGGTTCAAGGGATAAGTTTCTGTCTCTCAACCAGTCATTTCCATTTCACCTTAGTGGCTATTGTCATGCTAATCCAAGCATTTTTAGTTCTAATGCTCCCATGAAACAAGGAGTAGAAATAGAATTCAGTTGGGATCCCCCATGCGAGCCTATGTGTTCTTCGTTGTTGGACTGCAAGGATTGGCCAAATTCAACTTGCAACATTACCAGAGATGGCAAAAAGAGATGTCTTTGCAACACAGACTTTATTTGGGATGGGTTGAAATTAAACTGCACTCTAGAAGGCAGTAACATCTATCAATTAGAAAGGCAACTCTCCTTACCTAAGATCATTGTAATTACTTTTACAACTGTGATTGGATTAATTCTTCTGTCGACTACTGTTACATGTGTGTACTTGAGGAAAAGAAGCCAGAGCAAATCACAAGATAGCAGGGGATATGTACAGAAAAACTCAGGGTTTAACTTGTATGACAGTGAGAAATATGTCAGAGACTTGATTGAATCTGGTAGTTTCAAAGAAGATGATGCACAGGCCATAGATATTCCATTTTTCCATTTAGAAAGCATACTTGGGGCCACTAACAATTTCGCAAATGCAAACAAGCTTGGGCAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAATTTCCTGGAGGCCAAGAAATAGCAGTAAAGAGACTCTCAAGTTGTTCCGGACAAGGTTTAGAAGAATTTAAAAATGAAGTTGTGTTGATTGCAAAGCTTCAACATAGAAACCTAGTGAGACTTCTGGGGTACTGTGTGGAAGGAGATGAAAAGATGCTAATATATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGACCAGAAGCTGTGTGTTCTATTAGACTGGGATCTGCGCTTCAAGATTATTTTGGGAATTGCTCGAGGGCTCCTTTACTTGCATGAAGATTCTAGGTTGAGGATTATTCATAGGGACTTGAAAACAAGTAACATTCTACTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTAGCCAGGATATTTGGAGGAAAAGAGACAGTAGGTAACACAGTCAGAGTGGTTGGAACATATGGATATATGTCCCCGGAGTATGCACTTGATGGACACTTTTCAGTCAAGTCTGACGTCTTTAGCTTTGGTGTGGTGGTACTTGAGATAATTAGTGGAAAAAGGAACACAGGATTTTATCAACCAGAACATAAATTGAGTCTGCTAGGATATGCATGGCTTTTGTGGAAAGAAAGAAGGGAATTGGAATTCATGGACCAAACACTTAGCCAAACATGCAATGCAGATGAATGCTTGAAATGTGTGAATGTGGGGCTGTTGTGCTTACAAGAAGATCCAAATGAACGTCCCACAATGTCAAATGTGGTTTTGATGCTTGGTAGTGAATCTAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCAAGTAGAGCATCTACTTCAAGTAAACTTGAAACCTTTTCACGTAATGAATTGACAGTCACTATAGAACATGGGAGGTAG 3096 0.4086 MVNIKRDTRRIVILNWSSSHMLSTFLFCALFITFSFKHCSATDAITINNFLQDWGGDTLISKGGKFELGFFTPNGSSSGRRYVGIWYYKLTPLTVVWVANRDKPLLDSWGAFGIGEDGNLKLLDRSGKAYWGTNLEGSASPHRTVKIMDSGNLIVSDEVEEQGDHQVKILWQSFANPTDTFLPGMKMDGNLALTSWRSYEDPAPGNFTFVHCQGENQYVIWKRSIKYWKSSVSNKFSGSDEMSPAISYLLSNFTLRVSPNDTVPFLTSELYSDSRLVMTHWGQLKYMKMDSEKVWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGYKPNSIKSWNGGDFSGGCSRKTNVCSGDAERATFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCYAYSYKGTEKDTVCWIWYEDLNNLEEEYEDGCDLHVRVAFSDIESTGNSCGTCGTNSIPYPLSTGPSCGDPMYFSFQCNNSSGELDFKTPGGTYQVISINPDTRKFLIHRKDVLNCDQGSRDKFLSLNQSFPFHLSGYCHANPSIFSSNAPMKQGVEIEFSWDPPCEPMCSSLLDCKDWPNSTCNITRDGKKRCLCNTDFIWDGLKLNCTLEGSNIYQLERQLSLPKIIVITFTTVIGLILLSTTVTCVYLRKRSQSKSQDSRGYVQKNSGFNLYDSEKYVRDLIESGSFKEDDAQAIDIPFFHLESILGATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLIYEYMPNRSLDAFIFDQKLCVLLDWDLRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVGNTVRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQPEHKLSLLGYAWLLWKERRELEFMDQTLSQTCNADECLKCVNVGLLCLQEDPNERPTMSNVVLMLGSESNTLPSPKEPAFVIRRCPSSRASTSSKLETFSRNELTVTIEHGR* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1119 1031 Pfam S-locus glycoprotein domain 233 335 IPR000858 GO:0048544
Pvu11g1119 1031 Pfam Protein tyrosine and serine/threonine kinase 716 982 IPR001245 GO:0004672|GO:0006468
Pvu11g1119 1031 CDD PAN_AP_plant 356 437 - -
Pvu11g1119 1031 ProSiteProfiles PAN/Apple domain profile. 356 430 IPR003609 -
Pvu11g1119 1031 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
Pvu11g1119 1031 ProSiteProfiles Protein kinase domain profile. 713 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1119 1031 CDD STKc_IRAK 719 984 - -
Pvu11g1119 1031 Gene3D Phosphorylase Kinase; domain 1 679 788 - -
Pvu11g1119 1031 SMART serkin_6 713 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1119 1031 SMART ntp_6 360 436 IPR003609 -
Pvu11g1119 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Pvu11g1119 1031 SMART blect_4 50 177 IPR001480 -
Pvu11g1119 1031 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 1028 - -
Pvu11g1119 1031 SUPERFAMILY Protein kinase-like (PK-like) 696 984 IPR011009 -
Pvu11g1119 1031 Gene3D - 38 178 IPR036426 -
Pvu11g1119 1031 Gene3D Transferase(Phosphotransferase) domain 1 789 994 - -
Pvu11g1119 1031 Pfam PAN-like domain 361 421 IPR003609 -
Pvu11g1119 1031 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 201 IPR036426 -
Pvu11g1119 1031 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 42 1028 - -
Pvu11g1119 1031 Pfam Domain of unknown function (DUF3403) 986 1031 IPR021820 GO:0004674
Pvu11g1119 1031 Pfam D-mannose binding lectin 94 190 IPR001480 -
Pvu11g1119 1031 CDD B_lectin 55 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1119 Pvu-Chr11 13221922 13227123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1119 684 1031 Receptor kinase-like Gene Family AT4G05200 51.397 2.63e-121 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1119 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1119 - - var:108339799 1982.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1147 5 32463161 32468732 Pvu11g1119 11 13221922 13227123 PCT
Pvu11g1119 11 13221922 13227123 Pvu5g1148 5 32471297 32475270 PCT