Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1107 ATGGAATTGACAAGACCCAGTTATGCTGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAAGGGGGAGAAGAGGAGTTTCCTAGAGATGGTGGAGCGGCATCAGCCATTTATGTTTTTAGAACAAAGGTAGAAAATGACGGGACACTGTGCAGGAAACAATTGATAGAGAGGAACAATGAGTTGCATCCCCTGGAAGGGAGTGGTGACATAAAGACTATAAAAAGTAGCAAAAACATAGAAACTAATTCTCTGCCTCTTCAAGTAAAAAGAAAAACTTTGGACTGTAGTCCTGTTTCAGAAAAGGGTAGCTTTAGATATTTGTCAACAGAGCATTCGGGGTCAACCTTGGGTGCAGAAAGTGGTCATGGAAGAAGCTTGCTTGCTGATTCACCAAATAATCAAATGGCACCAAGTCATTCTCCTACACCAGCCAGTTCTCCATTGTCACCAAGTCATGGTCCAACACCAGCCAGTCCTCCATTATCACCAAGTCATGGTCCAACACCAGCCAGTTCTCCACCATCACCATCACCACCAACTCCAACTCCCAAAAAGGATTTACCACTCCCTCCAGATATGTTCGCACCATTGCCACCTTCACCCCCTATGCCTCGTTCTCTTCCCAAAAATTCTCTACCTAAATTACAGACTCCTGTTACTCCACCAACTAGCAATGATGAGAAAAAGAAGCAAACAACTATTTTAGCTGCCGCTTTATCAGGTGTTGTAATCTTGATAGGCTTGGCCCTGTGCTATCGTGAGGCCAGAAGCAACAAAACTGATAGCGATGACAGGCCTTTGCTCGTATTAACCTCAAATGATTATCCTGGCGGTTCAAAGAAGGTTGTTCAATTGGGAGATTCTGAAAGAGAAGAATATGACATTGGCAATGGAAAGAACCCTTCTAATGTTTCTAATGTTAGAAATTTGTCCGCTAGGAAGGGTGGAGATATCAAAGTCTCAATGGTTGACACAGCAGCATCATCATCATCATCAGTAGGCGTACGAAAACTAACAGTATCTCCTAGTGTAAAACCTGCCCCTCCTCCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTGGACCACAACCACCTCCTCCTCCGAAACAGCCACCTCCCGCCCCTCGTTTACCGTTTGGTGCAAAAGGTGCTAATCCTCCACCAGCTCCTCCAATTGGAGGTAAGAATCAAGGACCACTACATTCTAAAGAAGGAAGTTCAAATGAGGGTGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCAAAACCTGGCCAAACAATGGTGTGGCATGAGATCAGTTCAGGATCATTCGTGATCAATGAGGAAATGATGGAGTCTTTATTTGGCTGCGCCAACCAGAACAAGAATGATCGCAGAAGAGATACATCATTAGATAATTCAGTGCAATATATTAAGATTATTGATCCTAGGAAAGCACAAAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACGACAGAAGAAGTTGTCGATGCTCTTATAGAAGGTAATGAGATTCCCATGGAGCTGATCCAGACGTTGTTGAAGATGGCACCTACGCAAGACGAGGAACTAAAGCTAAGGCTGTTCACAGGACAACTGCATGAACTAGGGCCAGCAGAGAGGTTTCTCAAAGTGTTGGTTGAAATTCCATTCGCTTTCAAACGTCTTGAATGTCTGATGTTCGTGTATAACCTTAAAGAAGATTTCTCAAGCATTAAGGATTCTTTTGCCACATTAGAGGTGGCTTGCAATGATCTGAGAGAGAGCAGGCTGTTCCTGAAACTCCTAGAAGCAGTTCTGAAAACCGGCAATCGTATGAATGATGGAACCTACCGCGGTGGCGCGCAAGCATTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTCAAGGGAACAGACGGCAAGACCACACTCCTGCACTTCGTCGTCGAGGAGATCATCCGCTCCGAGGGAATCCGCACCGTGCGCAACAAAAGAGCCAGCCGGAGTACCAGCAGCGTCAACATCAACGAGGGCGGCGAGGAGTCCGAGGAACACTACCACAGCGTCGGCCTCCAGGTGGTGTCGGGCCTCAGCACGGAACTCGCGGACGTGAAGAAGGCGGCGCTGATAGACGGCGACGCACTCACGTCGGCGGTATCGAAGCTGGGGCACTCGTTGGTGAAGACGCAGGATTTTCTTGACAAGGACATGAAGAACCTGGTCGAAGAGAGCGAGTTCCAACGCAGCATGGAGCGGTTCATGGTGAACGCGAGGAAGGAGGTGGTGTGGATGGTGGAGGAGGAGAAGAGGATAATGACGCTGGTTAAGAGCACTGCCGATTACTTTCACGGCAATGCCGGGAAGGATGAAGGGTTGCGTTTGTTCTTGATCGTGCGTGATTTCTTGATCATATTAGACAAGGTTTGCAAAGAAGTGAAGGACGCCATCATAAAGCAGGCCAAGGCTTCCAGCAGTAGCAAGAAGGAGACTAGGACGACTTCTTCGGTTTCTTCACCTGACGCGCGCAGTCAACACTCGCCAAATCCACCCTCTGACTTCCACAGAAAGTTCTTCCCTGCCATAGCTGAGAGGAGAATGGATTATTCTAGTTCTGATGATGAGGACTTCTAA 2739 0.4786 MELTRPSYAVVYVILLCALAQGGSEGKGGEEEFPRDGGAASAIYVFRTKVENDGTLCRKQLIERNNELHPLEGSGDIKTIKSSKNIETNSLPLQVKRKTLDCSPVSEKGSFRYLSTEHSGSTLGAESGHGRSLLADSPNNQMAPSHSPTPASSPLSPSHGPTPASPPLSPSHGPTPASSPPSPSPPTPTPKKDLPLPPDMFAPLPPSPPMPRSLPKNSLPKLQTPVTPPTSNDEKKKQTTILAAALSGVVILIGLALCYREARSNKTDSDDRPLLVLTSNDYPGGSKKVVQLGDSEREEYDIGNGKNPSNVSNVRNLSARKGGDIKVSMVDTAASSSSSVGVRKLTVSPSVKPAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSSSSSGPQPPPPPKQPPPAPRLPFGAKGANPPPAPPIGGKNQGPLHSKEGSSNEGDAPKPKLKPFFWDKVNAKPGQTMVWHEISSGSFVINEEMMESLFGCANQNKNDRRRDTSLDNSVQYIKIIDPRKAQNLSILLRALNVTTEEVVDALIEGNEIPMELIQTLLKMAPTQDEELKLRLFTGQLHELGPAERFLKVLVEIPFAFKRLECLMFVYNLKEDFSSIKDSFATLEVACNDLRESRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVEEIIRSEGIRTVRNKRASRSTSSVNINEGGEESEEHYHSVGLQVVSGLSTELADVKKAALIDGDALTSAVSKLGHSLVKTQDFLDKDMKNLVEESEFQRSMERFMVNARKEVVWMVEEEKRIMTLVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCKEVKDAIIKQAKASSSSKKETRTTSSVSSPDARSQHSPNPPSDFHRKFFPAIAERRMDYSSSDDEDF* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1107 912 MobiDBLite consensus disorder prediction 118 236 - -
Pvu11g1107 912 PANTHER FORMIN-LIKE PROTEIN 1 911 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 264 287 - -
Pvu11g1107 912 PANTHER FORMIN-RELATED 1 911 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu11g1107 912 ProSiteProfiles Formin homology-2 (FH2) domain profile. 442 867 IPR015425 -
Pvu11g1107 912 PRINTS Proline rich extensin signature 147 163 - -
Pvu11g1107 912 PRINTS Proline rich extensin signature 174 186 - -
Pvu11g1107 912 PRINTS Proline rich extensin signature 188 209 - -
Pvu11g1107 912 PRINTS Proline rich extensin signature 209 225 - -
Pvu11g1107 912 PRINTS Proline rich extensin signature 340 365 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 150 215 - -
Pvu11g1107 912 SUPERFAMILY Formin homology 2 domain (FH2 domain) 510 858 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 856 886 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 297 316 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 856 891 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 330 453 - -
Pvu11g1107 912 Pfam Formin Homology 2 Domain 446 841 IPR015425 -
Pvu11g1107 912 Gene3D Formin, FH2 domain 448 877 IPR042201 -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 217 236 - -
Pvu11g1107 912 SMART it6_source 442 856 IPR015425 -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 133 149 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 330 345 - -
Pvu11g1107 912 MobiDBLite consensus disorder prediction 350 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1107 Pvu-Chr11 12834038 12839535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1107 446 903 FH2 protein (formin) Gene Family AT5G54650 61.325 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1107 - - vun:114170368 795.808