Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1101 ATGGTTACTCAAAGGAGAAACTTCAAGAATAAAGAGAGGTTTGTAGGTGCGGCAACTCCAGCACTCTCCTCTGCAGCATTCTCCGTCAAATCAAATCCTTTTACCATGGATGAACAAACCGAGAAGGCGTTTCTGAAGCAACCAAAAGTGTTCCTCAGCTCGAAGAAAACTGGGAAGGGGAAGAGACCTGGCAAAGGGGGTAACCGTTTTTGGAAATCCATCTAA 225 0.4533 MVTQRRNFKNKERFVGAATPALSSAAFSVKSNPFTMDEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSI* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1101 74 PANTHER 40S RIBOSOMAL PROTEIN S11 36 74 - -
Pvu11g1101 74 MobiDBLite consensus disorder prediction 54 74 - -
Pvu11g1101 74 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 36 74 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pvu11g1101 74 Gene3D - 22 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1101 Pvu-Chr11 12528344 12530424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1101 36 74 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.744 7.98e-10 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1101 K02949 - pvu:PHAVU_011G106900g 136.732