Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1094 ATGTGCAAAGGCGTGGAAGGAAAACAGCGTGGTGGTTCATGCAGGAGCTTCCCACCTCAACAGATTTCTTCATTTTCTGCAACAAGAGGTTGTTCCACTTCTTGTGAACTGTGTGGCTTGCAGGCTTCATTGTATTGCCCAGCGGATAATGCGTATCTGTGCAGGGAATGTGACAAATGGGTTCACAGAGCCAATTTTGTTGCCCTTAGACATGTGAGGTGCTTTTTGTGCAACACATGTCAGAACCTTACACACAGATATCTGATTGGAATCTCAGCAGAGATCCTTCTTCCACTAAGATTGATTGTGCAGAAACAGAACCTTGCTAACAACACCACCCATGGATTTTATTCAAGAAAGATTAAGAGACCTTTCATCTTTCTCTAG 387 0.4367 MCKGVEGKQRGGSCRSFPPQQISSFSATRGCSTSCELCGLQASLYCPADNAYLCRECDKWVHRANFVALRHVRCFLCNTCQNLTHRYLIGISAEILLPLRLIVQKQNLANNTTHGFYSRKIKRPFIFL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1094 128 CDD Bbox1_BBX-like 35 76 - -
Pvu11g1094 128 SMART bboxneu5 30 76 IPR000315 GO:0008270
Pvu11g1094 128 PANTHER B-BOX ZINC FINGER PROTEIN 29 30 106 - -
Pvu11g1094 128 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 30 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1094 Pvu-Chr11 12428315 12428823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1094 1 128 C2C2-CO-like Transcription Factor Family AT3G21890 38.346 1.11e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1094 - - gmx:100305571 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1094 11 12428315 12428823 Pvu11g1094 11 12428315 12428823 ECH
Pvu5g1171 5 33005653 33006629 Pvu11g1094 11 12428315 12428823 PCT