Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1090 ATGGGAAGCCAGAGTTACTTCAAGGCTTTGATTATTTGTCTCATAGCACTGATTGGGTCAACTCAAGCTCAATTGCAGCCAGGTTTCTATGCCAAAAGTTGTCCAAATGCTGAGAAGATCATTTTGAAGTATGTTGCTGAGCATATCCCCAATGTTCCATCTCTAGCAGCTGCTCTCTTAAGACTTCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTCTGAGCTCAACACCAAACAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACTCTACGAGGCTTTGACTTCATTGACACAATAAAGAGCCTTCTTGAAGCTGCATGCCCCGGAGTAGTCTCTTGTGCTGATGTCTTGGCTTTGACTGCTAGAGACTCTGTTCATGCCATTGGGGGGCCCTTTTGGAATGTTCCAACAGGTCGAAGGGATGGACTCATTTCTAGGGCAGCAGATCCTTTAGCGAGCCTTCCTGCTCCATTTCACAACCTCACTGTCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAACGACCTTGTAGTGCTTTCTGGTGCTCACACGATTGGTGTTTCCCACTGCTCAACAATTTCAACTCGTTTATACAATTTCACTGGCAGAGGTGACACTGACCCAACTCTAGATAGTAATTATGCAACAAATCTGAAGACCTTAAAGTGCAAGAACATCAATGATAACACCACACTTATTGAGATGGACCCTGGAAGTCGCGATACATTCGATCTTGGCTATTATAAACAAGTGGTTAAGAGAAGAGGCTTGTTCCAATCAGATGCTGCATTGCTCACAAGCTCTACCACAAGGTCTATTATCACTACGCAACTTCAATCAAATGAAGGATTCTTTGCAGAATTTGCCAAGTCCATGGAGAAAATGGGACGAATTAATCTTAAGCTTGGAACCGAAGGAGAGATAAGGAAACATTGTGCACGAGTAAACAACTAA 978 0.4294 MGSQSYFKALIICLIALIGSTQAQLQPGFYAKSCPNAEKIILKYVAEHIPNVPSLAAALLRLHFHDCFVNGCDGSVLLSSTPNNQAEKDSIPNLTLRGFDFIDTIKSLLEAACPGVVSCADVLALTARDSVHAIGGPFWNVPTGRRDGLISRAADPLASLPAPFHNLTVQLTLFGNVGLDANDLVVLSGAHTIGVSHCSTISTRLYNFTGRGDTDPTLDSNYATNLKTLKCKNINDNTTLIEMDPGSRDTFDLGYYKQVVKRRGLFQSDAALLTSSTTRSIITTQLQSNEGFFAEFAKSMEKMGRINLKLGTEGEIRKHCARVNN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1090 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Pvu11g1090 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Pvu11g1090 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 Gene3D - 28 324 - -
Pvu11g1090 325 PANTHER PEROXIDASE 3 324 - -
Pvu11g1090 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Pvu11g1090 325 Gene3D Peroxidase, domain 2 161 303 - -
Pvu11g1090 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu11g1090 325 PANTHER PEROXIDASE 25-RELATED 3 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1090 Pvu-Chr11 12340871 12343106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1090 14 324 Peroxidase AT1G05260 64.423 8.43e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1090 K00430 - gmx:547504 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1177 5 33041435 33043487 Pvu11g1090 11 12340871 12343106 PCT