Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1057 ATGGGGGTGTTAAGGGCTGCAATTGGGGATGCAATTTTGACATCAATGTGGGTTTTCATCATCTCAACTTTGAGGATTGCTTCAACTGAGTTAGCACTTTTCCTTAGCCTCCAACCCATCTCAATTGCAGGCCTCTTCATCACTACCATCCTCAACACCCTCTATGTCCTCACCATAAGCTTCATTGGAAGAGTCTTAGGTGGTGCCAGCTTCAACCCGTCAACCACTGTTTCATTCTACACTGCAGGTCTGAGACCTGACTCATCTCTTGCATCAATGGCTGTTAGGTTCCCTGCTCAGGCAGTTGGTGCGGCTGCAGGAGCCAAGGCTCTTCTTCTGGTAATGCCATCTGAGTACAAGCACATGCTGAAAGGTCCATTCTTGAAGGTGGACCTGCACACTGGTGCTATTGCTGAGGGGTTGTTGACCTTCACTCATAACATGGCTATCCTCTTTGTGATGCTGAGGGGTCCCAAAAACCCTTTTTTGAAGGTGTATTTGCTTTCTGTGGCTACTGCTGCTTTGGTTATCCCTGGTTCTGGCTTCACTGGACCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTATCAACAACAAGCACAACACTTGGGAGCAGTTTTATGTCTATTGGATATGCCCTTTCATAGGGGCTTCCTCAGCTGCTTTCATCTACCGTTCTGTCTTCATGTCACCAATCAAGCAAAAGAAGGCTTGA 720 0.4764 MGVLRAAIGDAILTSMWVFIISTLRIASTELALFLSLQPISIAGLFITTILNTLYVLTISFIGRVLGGASFNPSTTVSFYTAGLRPDSSLASMAVRFPAQAVGAAAGAKALLLVMPSEYKHMLKGPFLKVDLHTGAIAEGLLTFTHNMAILFVMLRGPKNPFLKVYLLSVATAALVIPGSGFTGPSMNPANAFGWAFINNKHNTWEQFYVYWICPFIGASSAAFIYRSVFMSPIKQKKA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1057 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Pvu11g1057 239 PANTHER AQUAPORIN SIP1-1 1 239 IPR044222 GO:0015250
Pvu11g1057 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g1057 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g1057 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g1057 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g1057 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g1057 239 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 239 - -
Pvu11g1057 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
Pvu11g1057 239 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1057 Pvu-Chr11 11529364 11530318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1057 1 230 Major Intrinsic Protein MIP AT3G04090 48.261 7.72e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1057 K09875 - gmx:100797126 384.03