Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1042 CATCAAAGCATCTTGTTCAACAATAACTATGAACGAAGCACAACTGTTGAGACTACGCATCTTAAAAGGAAGAATTTTATTAGACAGTCTGCAATAAGGTCCATAAGAAGAAAACAAGCCCATTTGGCTGACTTGGAGTGGCAAGTTAAACGACTAAGGCAGGAAAACTCACACTTATTCAACCAACTTAACGATGCAAGCCAACAATTTCGTGATGCTAATACCAATAATCGAGTGCTAAAATCAGATGTTGAAGCTTTAATAACTGAGGTAAAGTTAGTTGAGGAAATGGTGAGAAGGGGTACAATCACCCCTTTCAACAACCAGATTCTTCCAAGCCAGACTCAATTAAGCACCGGTTCAGTTCTCAACACCAATATGTCCACACAGACCTCCTGTTGGAATTATGCTTTCTATATGGGTGTCTCAAGCTAG 435 0.3977 HQSILFNNNYERSTTVETTHLKRKNFIRQSAIRSIRRKQAHLADLEWQVKRLRQENSHLFNQLNDASQQFRDANTNNRVLKSDVEALITEVKLVEEMVRRGTITPFNNQILPSQTQLSTGSVLNTNMSTQTSCWNYAFYMGVSS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1042 144 PANTHER BASIC LEUCINE ZIPPER 63 10 120 - -
Pvu11g1042 144 PANTHER BASIC LEUCINE ZIPPER 9 10 120 - -
Pvu11g1042 144 Gene3D - 21 75 - -
Pvu11g1042 144 Coils Coil 35 69 - -
Pvu11g1042 144 CDD bZIP_plant_GBF1 20 71 IPR045314 GO:0003700|GO:0006355
Pvu11g1042 144 SUPERFAMILY Leucine zipper domain 28 69 IPR046347 GO:0003700|GO:0006355
Pvu11g1042 144 SMART brlzneu 13 79 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1042 Pvu-Chr11 10994953 10995387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1042 21 121 bZIP Transcription Factor Family AT5G24800 57.426 1.72e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1042 K25784 - pvu:PHAVU_011G101200g 288.115