Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1033 ATGTCAATGGAAATGATGGCAACGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCTTACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGGAGCGTCCCTTCAAGCATTTCCTCCTCAAGAGCCTCAGTCACAGAAACAGCACCTAAGCTTTGAAGAACCAAGCAGCAAGGAACTGGGATCCTCATCTTCAAAATGTAACAAAATAGCGGCATTTGAGGCAGTAGAGCATGAACAACCAAGGATTCCTCCCATTCGTCCTACAGAGAAGAGACATCGTGTGCCTTCTGCATATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCTCCGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAACAGTCAAGCAAAGTTGGACCAGGGAGAAGCAGCTGAAAAGTCCAATGGATTCTACTGA 552 0.4511 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQEPQSQKQHLSFEEPSSKELGSSSSKCNKIAAFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQAKLDQGEAAEKSNGFY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1033 183 Pfam YABBY protein 7 160 IPR006780 GO:0007275
Pvu11g1033 183 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 1 183 - -
Pvu11g1033 183 SUPERFAMILY HMG-box 105 153 IPR036910 -
Pvu11g1033 183 MobiDBLite consensus disorder prediction 59 85 - -
Pvu11g1033 183 PANTHER PROTEIN YABBY 6-RELATED 1 183 IPR006780 GO:0007275
Pvu11g1033 183 Gene3D High mobility group box domain 109 178 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1033 Pvu-Chr11 10846106 10852521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1033 1 183 C2C2-YABBY Transcription Factor Family AT1G08465 64.894 7.70e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pvu11g1033 YABBY 4.9e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1033 K25796 - gmx:100500026 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1217 5 33854923 33864003 Pvu11g1033 11 10846106 10852521 PCT