Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1026 ATGGACGTTGATTCCTCGATGGTGCCGGAGGCCGATCACGATTCGGCGGTGCAGAACCATGCCGAAAGAGACCAGTTAGGAGAGTCGCCGCCTCCGTCGCCGCCGCCTTTGTCGACGGGAGGTGGATCTCCGGCTCAGTCGCCGTCGCAACAGCAGCCGTCGTCGCCGGTGACGGCGGGTCAGGTGCAGCACAGTCCGGTGGTTGGTCCGAGACTCGCGCCGACCTACTCAGTGGTAAATGCGATTTTGGAGAAGAAGGAGGACGGGCCGGGACCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTTGGAGAGGAGGGGACGTCGGGGTACATTGGTCCAAGGTTGATTTTGTTCGGCGGTGCCACTGCGCTTGAAGGGAGTTCTGCGGCCTCAGGGACTCCTTCATCCGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACCGCTGATGTCCACTGTTACGATGTTATAACTAATAAATGGTCTAGGATAACTCCCATCGGTGAGCCTCCAACCCCTAGGGCTGCACATGTTGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCTGAGGATCTTCATGTTCTTGATCTCACTCAGCAAAGACCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCAGGACCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGATATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTGTGGGCTTTAGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGATCTGACGGGCTTCTTCTGCTTTGTGGCGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCCATTGCTCCTGGTGTCTCACCGTCTCCAAGATATCAACATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGGGGAGGACGGATGGTTGAAGATTCATCAAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCTGCTGGTGGAGATGCCTCTGTTGAGTTGACACGGCGTTGTAGGCATGCTGCTGCTGCAATTGGTGACTTGATTTTTATCTATGGTGGTTTACGGGGCGGGGTCTTGCTAGACGATTTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAGCTGCTGCTTCACATGCAGCAGCTGCAGCTGCATCTAATGCACAAGCTGGACGACTACTTGGACGATATGGTGCATTTGTTGATGATAGGACAAGGCAAACCATGATTGAAGCAGCTCCAGATGGTTCAGTTGTTTTGGGAAATCCTGTTGCCCCCCCTGTAAATGGGGACATATATACTGATATCAGCACTGAAAATGCCTTACTCCCAGGATCTAGGCGAACAAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCGACACTGGCTGCTGCGAAAGCACGACAAGTAAATGGAGAAGTTGAATTGCCTGACCGAGATCGTGGGGCTGAGGCAACACCTAGTGGGAAACAAATATCTTCCTTGATTAAGCCTGATTCTTCTGTGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTGGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCAGGCGAGTCAGTTATGGAACTCCTGAAAGTGCAACAGCAGCTAGAAAATTATTAGACCGTCAGATGTCTATCAATAGTGTCCCAAAGAAGGTTGTAGCTCACCTCTTAAAGCCTCGTGGCTGGAAACCGCCAGTTCGGCGACAGTTTTTCTTGGACTGCAATGAAATTGCGGATCTATGTGATAGTGCAGAGCGGATATTTTCAAGTGAACCAAGCGTCTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTTCACCGTCAACTGCTGGTGACATAGCATACATCGACTATCTATTCCTTGGAGATTATGTTGATAGGGGTCAGCACAGCCTGGAAACTATTAGCCTTCTGCTTTCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATAGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGTATCAACCGTCTGTTTAATTGGCTTCCTCTGGCAGCATTAATTGAGAAAAAGATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCACGTAGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTACTGTGGTCTGACCCTACAGAGAATGACAGTGTGGAAGGGCTTCGGCCAAATGCTCGGGGTCCAGGATTAGTTACTTTTGGGCCTGATCGGGTCATGGAATTTTGTAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATCACACTTTTTTCTGCGACAAACTACTGTGGTACCGCAAATAATGCTGGAGCGATTTTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCCTTACCACCTGCAATTTCTTCACCAGAAACTTCGCCGGAGAGACATATTGAGGACACATGGATGCAGGAGTTGAATGCCAACAGACCACCAACACCGACTAGAGGCCGTCCTCAAGTAACAAATGAACGAGGTTCTCTTGCTTGGATATAG 3024 0.4927 MDVDSSMVPEADHDSAVQNHAERDQLGESPPPSPPPLSTGGGSPAQSPSQQQPSSPVTAGQVQHSPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGSSAASGTPSSAGNAGIRLAGATADVHCYDVITNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAASNAQAGRLLGRYGAFVDDRTRQTMIEAAPDGSVVLGNPVAPPVNGDIYTDISTENALLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSSVSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLSLKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNERGSLAWI* 1008
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1026 1007 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Pvu11g1026 1007 Gene3D - 640 980 IPR029052 -
Pvu11g1026 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1007 - -
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 983 998 - -
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 1 69 - -
Pvu11g1026 1007 CDD MPP_Bsu1_C 656 958 IPR041758 -
Pvu11g1026 1007 Gene3D - 75 201 IPR015915 GO:0005515
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 983 1007 - -
Pvu11g1026 1007 Pfam Galactose oxidase, central domain 228 281 - -
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 568 584 - -
Pvu11g1026 1007 PIRSF STPPP_BSU1 40 1007 IPR012391 GO:0004721|GO:0009742
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 42 62 - -
Pvu11g1026 1007 SUPERFAMILY Metallo-dependent phosphatases 662 967 IPR029052 -
Pvu11g1026 1007 Gene3D - 202 453 IPR015915 GO:0005515
Pvu11g1026 1007 ProSitePatterns Serine/threonine specific protein phosphatases signature. 773 778 IPR006186 GO:0016787
Pvu11g1026 1007 Pfam Calcineurin-like phosphoesterase 704 911 IPR004843 GO:0016787
Pvu11g1026 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1007 - -
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 739 766 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 772 796 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 810 836 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 840 867 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 900 920 IPR006186 GO:0016787
Pvu11g1026 1007 PRINTS Serine/threonine phosphatase family signature 922 938 IPR006186 GO:0016787
Pvu11g1026 1007 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
Pvu11g1026 1007 SMART pp2a_7 676 960 IPR006186 GO:0016787
Pvu11g1026 1007 MobiDBLite consensus disorder prediction 552 584 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu11g1026 Pvu-Chr11 10726653 10746135 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1026 668 903 Calmodulin-binding Proteins AT5G63870 29.412 4.41e-26 108
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1026 - - gmx:100788485 1794.63
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1026 11 10726653 10746135 Pvu11g1026 11 10726653 10746135 ECH
Pvu5g1228 5 33984901 33996355 Pvu11g1026 11 10726653 10746135 PCT