Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1019 ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACTGTTGGGATGTCTAATTTTCCATACCGAGATGGGGAGGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATAGTGAATAATTCCGTCAGTATTGCTGGAGAAGGGATCGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGCAGAGATGCGTATCCACCAGAGGTATATCCTGAGTTGCTTTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCCCATGGCGTTGTTCAATTTGGTTCTTTATTGCCCATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTACAATTGGGATGTGTACCTGCTGCACTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAGACTTGGTGTACCCGTCACCGTTGATCCACCTGTCGATACTTCTAACTGCACTCCCTGTGCAGCTAATGGCTCCAACCAACTAACTAATTCTACTCTTGCTTCAAGGCCTGTTGTTCCATTACCTCATCCACCAAGGGGAGAAATAGATAATTACCAGGATTCTGTATTGACACCTCAAACCTATGACCCAAACCAAATATTTGATAGCATTTGCCAACCTAAGGCTCATTCAATGATCAAAATAAATGCCTATGGCCAACAGAAGAAGAGAGTCATCCAGGCTGAAGCTAAAGTGATACCTGCAAATTTGGATTCATGTATGCAACAACATTCTGCTTATAATGCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATCTTAGTTGCAGCCTTAACTATATGGAACAACAAACATCAGGTGTTGGCAGACAGAGTCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAATATGCCTCAACTGAAAACAGGTGGAGGCAAAATTCTTGAGCAGAATCTGAGTTCTGGTAGCAATTCACTATTTGGAGGAATCCCAATATGTAGTGGGAGTAATCTTTTGAGGACAAATATGATTAACAGCTCTGTTTCAAACTCTCCCAAAGTACCCACTTCTGAATTTTCTGGAACTCACAAGATTGGGTTTGGACTTCTAAATAACAATTCTACAACTGATGCTAGGCTTTGTTCTGTGCCTAATCTCTGTAATCAATCAGTTACGAGTCACGTGAATCTAGAAAACTCTGCTCAGAACCTTCCCAATGCCTGTGATGCTTTCGTTTCAACTGATCAAAGGATACATGACGATTTGCTTCATGCTGCTCTTAAGATTCCATCTCTTCATCTTGATGAGCATGAGCCTATGGGTGATCGTATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTAGTCAAAATATGGTGAAAAGGAATGTTAAACATGAAGAGACCTATACTCAACTTCCATCAGGGGATGATCTCTTTGATGTTTTAGGTGTGGATTTGAAAAGGCGACTACTCAATGGAAACTGGGATAAGTTGCTTGCCACTGATTCAGAGGCCAACAGAGAGCGTCTAGATAAAAAGGCAGCATGCATGAATTTGGAAGGTGTATGTCCTGATAATAGCTATTCAGTTAAAGATGCAATATCAGAGAGCGGCATCTTCTCTGGAACGGGCTCTGACCACCTCTTAGACGCTGTAGTTTCAAAAGCTCAATCGGCCCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACATTGACCAGGGTTAGCACTGCCTCCGTTTCCTCGCCTGCCTGCAAGCAGGTTCTGTCTGATCATGTCCTGAAGGGATTGTTTGATTTTCCCAAGAATGGGGCTAAAAGAGCTGCTGGGGAAACAAGTTCTCCTAGGTCTGGGTGCAGCAAGGATGATGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCGTGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCAAATAGGAAAAGACTTAAACCTGGAGAGAATCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAATTAAGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAGAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAGCGTGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCAAACAGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCGTCATCTTCATCAAATGCAGCTGATAACAACATGATGGTGTACCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2850 0.4239 MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMIVNNSVSIAGEGIVGRATFTGNYQWILMNNFSRDAYPPEVYPELLYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPAALLSEDYSAKVSNERLGVPVTVDPPVDTSNCTPCAANGSNQLTNSTLASRPVVPLPHPPRGEIDNYQDSVLTPQTYDPNQIFDSICQPKAHSMIKINAYGQQKKRVIQAEAKVIPANLDSCMQQHSAYNARSAFNELAGFNQSNLSCSLNYMEQQTSGVGRQSHVNPNMNPSSASNMPQLKTGGGKILEQNLSSGSNSLFGGIPICSGSNLLRTNMINSSVSNSPKVPTSEFSGTHKIGFGLLNNNSTTDARLCSVPNLCNQSVTSHVNLENSAQNLPNACDAFVSTDQRIHDDLLHAALKIPSLHLDEHEPMGDRIPGFVQDCLNKDVTSQNMVKRNVKHEETYTQLPSGDDLFDVLGVDLKRRLLNGNWDKLLATDSEANRERLDKKAACMNLEGVCPDNSYSVKDAISESGIFSGTGSDHLLDAVVSKAQSAPKQSSDEMSCRTTLTRVSTASVSSPACKQVLSDHVLKGLFDFPKNGAKRAAGETSSPRSGCSKDDAGNCSQMTSIYGSKLSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKHTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSSNAADNNMMVYHSFPQATQIPATGRPSSLQ* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1019 949 MobiDBLite consensus disorder prediction 707 750 - -
Pvu11g1019 949 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 949 - -
Pvu11g1019 949 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Pvu11g1019 949 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 735 784 IPR011598 GO:0046983
Pvu11g1019 949 MobiDBLite consensus disorder prediction 667 686 - -
Pvu11g1019 949 MobiDBLite consensus disorder prediction 725 750 - -
Pvu11g1019 949 CDD bHLH_AtLHW_like 739 808 - -
Pvu11g1019 949 MobiDBLite consensus disorder prediction 707 721 - -
Pvu11g1019 949 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 949 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1019 Pvu-Chr11 10417317 10423980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1019 537 920 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.470 7.75e-118 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1019 - - gmx:100812899 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1235 5 34151294 34158564 Pvu11g1019 11 10417317 10423980 PCT