Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu11g1012 | ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGAGGAGCATTTGGAGCTGCTATTCTTGTTCACCACAAGGCTGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTTGCAAGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCATCCTTACATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGCTGCTATGTCTGCATTGTCACTGGATATTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTGGAATACCTGCATTCAAATTTTGTTTTGCATCGTGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGCCTTGCCAAGACACTAAAAGCAGATGATTTGGCTTCCTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATACCATATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATACGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAATCCTGAACATCGGCCAACAGCATCTGAGGTGCTTAAGCACCCTTATTTACAGCCTTATGTGGATCAATACCGTCCAGCTTTCAGACCTCCATCAACCTGTTCTCCTGAAAAATCAATTTCTACTGTCAACTATCCTCGAAAAAACATGGCTGAAAGTCAAAACAGTAATAGTTCCAACAGTGATAAAGATAGTTTGATGTCAAATGAGAAAAACTTTGCAACAGCGGCATTACCGAAGTGTGATAACAAAGCCACTGAGATGGATCAAACATCTATCGATGATGATGTTTCAGAGGAAGAAAATGGCCCTGGTAATGCCAATGGCAATACCAAAACAGGTGAGCAAGAGGTGATGAAACCATCTCATAATGCACACCATTCTCATGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCCTTGAAAGAAGGAAAGGCTAGAGAAGCTACTTCTCCTATGAGAGGCAATCGCATAAAGCCTGGTGGTGTATCAACAACACAGAAAATAAGTACCGAGACACTGTCTAAATTGCCTAAGCCTAATTTTATTGTTCCTATTGTGAAACCTATGTTAGAGTCACCAACTATTTCACTTGCACGGGCAACCCCTGACTCTGCAAAAAAAATTCAGGGGTCACATCATTCAAAGCAACAGTTTCTGATGGTAGAAGCCTCACCAAAACTTAAAGCTAGACATGATTTGACTCCGCCACCTGCAGTTGTCAAACAAGTAGATGGAGATGTAGTTCCTCCCAAGCCAAGACAAAGAACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCGGGAAGAATGAGGCTGGCTGGAATTGATGTTCCAAATGCACCAAATGATACTGGAAAGCTAGGCACAGATAAAATAGTTCAGGAACATGAGATGAGCCCGTGTCAGCTGGCCAAAGACAATGTACCAAATTTTTCGAGACAGGTTACCAAAGAGCCTCAGAAGGTTTTTGAAAGAAGTTCCAAAGGAATGCAAACAGACAGCAGCAATTCTGCTTCATCTTCAGTTTCTATCCGAGGTGAACTTGCTGATGATGCTACAACTTTTATTGACATGAGAGAGCAGATGCTTCCTGTACATGTGAATGTAAGCCACATTGTAGGTGTGGAATCATGTCCTGACAGCAGCCCGCCGACAACTTGTGCACATTGTAAGATGGTTGAAAATGTTCCTAAAGATTCCTGTGAGATTGCCATGAATTTTCACAATACTATAAGTAGTAATGAGAAAGTGAATTCCAGTTTAAGTCTAGATCACCATGTTGAAGATTCTGAGGTAACACTTGCTTCAGAAGGTGGTCTTCTTAAATCCCAGACAACTATGTCTACTACATCCGGCTGTGATAATGGATCTGTTGATCCCTCTGCTGGAGCCACCAAAGAAATCAAAGATTTTCAAGATATTACCAAGGAAATGCCTTTGGCCAAGAATACCCAACGCGCACCCACAAGTTCTGGAGAAAAGTCTGCTCATGTAGAAGTTAGTCCAGAAAGTGAACCTGATCTATTTGTTCAGCCAGCACCTGGATGTAAGTCCCCTGGTGATGACAAATTCACTGTGAGGGAGCGACTGTCACCTGTGGTTGAAACGGTTCCTCTGGTTACCCCTACTAAATTATCAAACCAGAAAGTTTTGCAAGAGAAAGGAACTGTGCTGCAGAATCCACCAGAAAGGCCTGATACTGGTCATCTTCCTCCAGCCTTTGACGAAGTTATCCATGTCATACGCCATAGTAGTTACCGTGTTGGCAGCGATCAGCCAGTAAAGGAATCGGTAGAGATGGGAGTTCAAAATGTAGATGTTGGTAAATTTATCAATGTTGTGAGGGATGATTTAGAAATGAGGAACATAACGTCACCTTTGACACTCAAATCTTCAAGTTGCTCTGATGTTCCAAGCTTGAAATCTGATCAGTTGGAAATGAAAAACTTAAACACTCCTCCCATCCTTAAATCTTCAAGTTTCTCCGATTCTTCCAGCATGAAATCAAGCAATTCTGATCATCCTGGTCTTAAGGAACAAGATGTGAGTAACCCTCCTCCTCTAGTGTCAGAACCTGAATCTACTGAGCTCAGTAAAAGTAACACTCCTGTGAATGAAGAGAAACTACCAGCAAAGGAAACATTGGATGTGAAATCTTTCAGACAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGAGGACGCTCTTCATAA | 3105 | 0.4235 | MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFRPPSTCSPEKSISTVNYPRKNMAESQNSNSSNSDKDSLMSNEKNFATAALPKCDNKATEMDQTSIDDDVSEEENGPGNANGNTKTGEQEVMKPSHNAHHSHVESKQPKTIRNIMMALKEGKAREATSPMRGNRIKPGGVSTTQKISTETLSKLPKPNFIVPIVKPMLESPTISLARATPDSAKKIQGSHHSKQQFLMVEASPKLKARHDLTPPPAVVKQVDGDVVPPKPRQRTPPSLLRRPSFSGRMRLAGIDVPNAPNDTGKLGTDKIVQEHEMSPCQLAKDNVPNFSRQVTKEPQKVFERSSKGMQTDSSNSASSSVSIRGELADDATTFIDMREQMLPVHVNVSHIVGVESCPDSSPPTTCAHCKMVENVPKDSCEIAMNFHNTISSNEKVNSSLSLDHHVEDSEVTLASEGGLLKSQTTMSTTSGCDNGSVDPSAGATKEIKDFQDITKEMPLAKNTQRAPTSSGEKSAHVEVSPESEPDLFVQPAPGCKSPGDDKFTVRERLSPVVETVPLVTPTKLSNQKVLQEKGTVLQNPPERPDTGHLPPAFDEVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTLKSSSCSDVPSLKSDQLEMKNLNTPPILKSSSFSDSSSMKSSNSDHPGLKEQDVSNPPPLVSEPESTELSKSNTPVNEEKLPAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS* | 1035 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu11g1012 | 1034 | Coils | Coil | 971 | 997 | - | - | |
Pvu11g1012 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 87 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 364 | 379 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 348 | 363 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 486 | 514 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 272 | 380 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 937 | 957 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 394 | 416 | - | - | |
Pvu11g1012 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu11g1012 | 1034 | CDD | STKc_Nek | 7 | 262 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 901 | 959 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 569 | 594 | - | - | |
Pvu11g1012 | 1034 | Pfam | Protein kinase domain | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu11g1012 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 90 | 343 | - | - | |
Pvu11g1012 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu11g1012 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 312 | IPR011009 | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 901 | 928 | - | - | |
Pvu11g1012 | 1034 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE | 1 | 1017 | - | - | |
Pvu11g1012 | 1034 | ProSitePatterns | Protein kinases ATP-binding region signature. | 14 | 37 | IPR017441 | GO:0005524 | |
Pvu11g1012 | 1034 | SMART | serkin_6 | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 279 | 317 | - | - | |
Pvu11g1012 | 1034 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK | 1 | 1017 | - | - | |
Pvu11g1012 | 1034 | MobiDBLite | consensus disorder prediction | 575 | 594 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu11g1012 | Pvu-Chr11 | 10239827 | 10246887 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu11g1012 | 14 | 263 | MAP Kinase Kinase Kinase | AT1G53570 | 31.765 | 9.83e-37 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NEK | Pvu11g1012 | Pkinase | 7.9e-66 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu11g1012 | K08857 | - | gmx:100818747 | 1654.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu5g1248 | 5 | 34359972 | 34368173 | Pvu11g1012 | 11 | 10239827 | 10246887 | PCT |