Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1005 ATGTCTTCCACCAAGAAAAGTCTTCTTAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAAGCCTCTGAAGTGCATGACCCAACCCCAAAACCCAAAACCTCCCACTCTCACCAAAACCCAAACAACCTTAGCAGCATGGCCTCTTCCACCACTTCAATGGAACCCCTAGATGAAGAAGAGTTCACCTCTACCACAGTATCCGAATCCGAGACTTTTCATGATCCCAACAATACCAACAACGTTGTACTCAAACGAAGCCCTCTTGTGGATAGTGTGGCCGTTGAGAAGGACTCTTCCAACCCATATCATGATTTCAGACACTCCATGCTCCAAATGATCTTTGAGAAAGAGATCGAGTCAGAGGACGATCTTCAAGATCTTCTGCAATGCTTTCTTCACCTGAATGCACCATGTAACCACCACGTCATCGTCAAAGCCTTCAACGCCATCTGCGAAGAAGCCTTTCCTCGCAAGGTTAGTACCACTCCGGCTGCGTCTGAACCTTCTCCCTCGTGGTTCAAAAGAGCAAGTGATCGTGGCCAAGAGTAA 564 0.4752 MSSTKKSLLRTVFTANGSCGCSKTKASEVHDPTPKPKTSHSHQNPNNLSSMASSTTSMEPLDEEEFTSTTVSESETFHDPNNTNNVVLKRSPLVDSVAVEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCNHHVIVKAFNAICEEAFPRKVSTTPAASEPSPSWFKRASDRGQE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1005 187 MobiDBLite consensus disorder prediction 38 85 - -
Pvu11g1005 187 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 165 - -
Pvu11g1005 187 Pfam Transcriptional repressor, ovate 103 158 IPR006458 -
Pvu11g1005 187 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
Pvu11g1005 187 MobiDBLite consensus disorder prediction 20 85 - -
Pvu11g1005 187 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 97 156 IPR006458 -
Pvu11g1005 187 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 165 IPR038933 GO:0045892
Pvu11g1005 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pvu11g1005 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1005 Pvu-Chr11 10126415 10126978 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu11g1005 Ovate 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1005 - - gmx:102660065 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1251 5 34396327 34397013 Pvu11g1005 11 10126415 10126978 PCT