Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0999 ATGACGTTGTTCCTCGGTTCCGAGACAGTGGCGTCGTCATCCATTTCGCACATGGTAGTGGCGAGCGTTTCGGTGGCAGAAAGAAAACTCGACAAGGAATTCTCGGTACTTCTATCGTCTATATTCCAAAATACTTCTTCTGAAGTAGTTAAGGAAAATGATGGAAATACAACAATATTGGGAATACCAACAGAATCAACATTATTGGAATTTGGCTTGCTTTCAGATGGCGATTTTGATGCACAACGTGCAACATATAAGATACTTAAGGTTGAGCCTTTCAATTCATTCCGAAAGAAGATGTCTGTGCTAGCAAAGAATGTCTCTGACATTATAAATGGCTTTGCCTCTGAAGCTTTGCGAACTCTTTGTTTAGCTGCTAAAGATGTAAATGAATCCCTAGGGGAAACCAGCATCCCTGAAGATGGTTATACTCTGATAGTCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAAGATCTGTTCAAACTTGCTTAGCTGCTGGAATAACTGTCCGCATGGTTACCGGTGA 537 0.4227 MTLFLGSETVASSSISHMVVASVSVAERKLDKEFSVLLSSIFQNTSSEVVKENDGNTTILGIPTESTLLEFGLLSDGDFDAQRATYKILKVEPFNSFRKKMSVLAKNVSDIINGFASEALRTLCLAAKDVNESLGETSIPEDGYTLIVIVGIKDPVRPGVKICSNLLSCWNNCPHGYR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0999 178 Pfam Cation transport ATPase (P-type) 46 108 - -
Pvu11g0999 178 Gene3D - 6 107 IPR023299 GO:0000166
Pvu11g0999 178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 26 160 IPR023299 GO:0000166
Pvu11g0999 178 Gene3D - 108 157 IPR023299 GO:0000166
Pvu11g0999 178 PANTHER CATION TRANSPORTING ATPASE 30 105 - -
Pvu11g0999 178 PANTHER CATION TRANSPORTING ATPASE 106 162 - -
Pvu11g0999 178 PANTHER CALCIUM-TRANSPORTING ATPASE 106 162 - -
Pvu11g0999 178 PANTHER CALCIUM-TRANSPORTING ATPASE 30 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0999 Pvu-Chr11 9981354 9983075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0999 16 161 Primary Pumps ATPases AT2G41560 44.554 5.69e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0999 K01537 - pvu:PHAVU_011G096900g 349.362