Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0982 ATGACAAACATCATGGAAGATCATCCACCTGGTTTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTGGGTTCTACCTGCACAACAAGCTAGAGGGTTTAAGAAATGCTGCTGCCATAGATAGAGTTATCCCAGTTGTTGATATCAATGCTCTGGAGCCCTGGAACCTCCCAACGCTTGCTGGGGAGCTTTGTCGTGGGGATACAGAGCAATGGTTTTTCTTTTCACCTGGGCAAGAGAGAGAAGCCAGAGGAGGGAGACCTAGCAGAACAACAGCTTGTGGGTACTGGAAAGCTACTGGTTCCCCTGGCTATGTTTATTCTTCAGATAACAGAGTCATTGGGGTGAAGAAATCCATGGTCTTCTACAAAGGAAAAGCCCCTATGGGAAGAAAAACCAAATGGAAAATGAATGAGTACAAAGCTATCTCAGTTCCTCACCAATCCAACTCTGTCATCCCTGAGTTGAGATGCGAATTCAGCTTATATCGGGTATATATTGTATCTGGAACCTTTCGAGCATTTGATCGACGTCCATCAGAGAGTGAAGGAACAGAGTCACGTGTTCATCAAAGTTCATCTCAAATTTCTCAGCTCCCAGAAGGTGGAGATTCAAGTAGCACAAATTGGAACCAGGTTCAGCTCCAAGAACCCTTATGGGATTTGGAATGGGAACACTTTAATTGGGTCTGA 690 0.4493 MTNIMEDHPPGFRFFPTEEELVGFYLHNKLEGLRNAAAIDRVIPVVDINALEPWNLPTLAGELCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRVIGVKKSMVFYKGKAPMGRKTKWKMNEYKAISVPHQSNSVIPELRCEFSLYRVYIVSGTFRAFDRRPSESEGTESRVHQSSSQISQLPEGGDSSSTNWNQVQLQEPLWDLEWEHFNWV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0982 229 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Pvu11g0982 229 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Pvu11g0982 229 MobiDBLite consensus disorder prediction 176 208 - -
Pvu11g0982 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 197 - -
Pvu11g0982 229 MobiDBLite consensus disorder prediction 185 208 - -
Pvu11g0982 229 Pfam No apical meristem (NAM) protein 9 140 IPR003441 GO:0003677|GO:0006355
Pvu11g0982 229 SUPERFAMILY NAC domain 5 165 IPR036093 GO:0003677|GO:0006355
Pvu11g0982 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 90 8 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0982 Pvu-Chr11 9827824 9829229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0982 11 228 NAC Transcription Factor Family AT5G22380 56.710 1.15e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu11g0982 NAM 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0982 - - gmx:100781321 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1267 5 34629135 34630124 Pvu11g0982 11 9827824 9829229 PCT