Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0973 ATGGCTGAGGCCGAGGAACTGCCCCGGACTATCGTGCGCCGTGTTGTGAAGGATAAACTGTCCCGTTGCTCTGAAGAAGGAGAAATTTCCGTCAGCAAAGATGGTCTTCTGGCATTCTCAGAAAGCGGTAGGATCTTCATCCACTACCTTTCTGCCACGGCCAATGACATATGTAGGGAGGCAAAGAGACAGATTATCACCGCAGAGGATGTTTTCAAAGCTCTTGAAGAAACCGAGTTCTCTGAGTTTGTTCGTCCTCTAAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGTTGGAAAGAAAGCGGCAGTGTCAAAGGGAAAAGAAGATGAGTCGAGAAAGAAAAGGAAATTGGAAGCTGAGTCATCTGATAAGGGTGAGGCATCCAATAATGACGAGTCATCTGATAAAGGGGAGGGTTCTGATAAAGGTGAGGGCGAGGACAATGAATGA 456 0.4649 MAEAEELPRTIVRRVVKDKLSRCSEEGEISVSKDGLLAFSESGRIFIHYLSATANDICREAKRQIITAEDVFKALEETEFSEFVRPLKASLEEFRKKNVGKKAAVSKGKEDESRKKRKLEAESSDKGEASNNDESSDKGEGSDKGEGEDNE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0973 151 Coils Coil 58 78 - -
Pvu11g0973 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 146 - -
Pvu11g0973 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Pvu11g0973 151 Gene3D Histone, subunit A 1 147 IPR009072 GO:0046982
Pvu11g0973 151 SUPERFAMILY Histone-fold 7 121 IPR009072 GO:0046982
Pvu11g0973 151 MobiDBLite consensus disorder prediction 98 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0973 7 95 CCAAT-HAP3 Transcription Factor Family AT4G14540 30.337 1.38e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pvu11g0973 CBFD_NFYB_HMF 1.8e-06 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0973 K02326 - gmx:100306382 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0973 11 9672437 9674466 Pvu11g0973 11 9672437 9674466 ECH