Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0964 ATGGCGGGCCAAAGAGTTGGAGAAACGGGTCTGTCTGAGTCAGGACCTTCAAGTCACCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCTCAGCATCAGGGCTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCTTTTGCTCTGTCAGGAATTAAGATAAGAAGTGATGAAGCCAAATCATCAGCTTTATTCACAGGCAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAAGCAAAACTGAGCTCCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCAGATCATCAACAGGCTTTTGATCAGCTTCAACAACAACAGGAGACAGCAGCTGATGCCTCAAGAGCAGGCACATCACAGACTCAATCAGCAGCCAAATCACCACAAGAAAAGAGGAAAGGAGCTGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACATCTTGAACAAGACCTTCAAAGGGCTCGCTCTCAGGGAGTGTTTATGGGTTGTGGTGGTGCTGGTGGAAGTATAAGTTCTG 742 0.4596 MAGQRVGETGLSESGPSSHHVPYGVLHGINTSASGLMNQGSAFDFGELEEAFALSGIKIRSDEAKSSALFTGRPSATLEMFPSWPMRFQQTPRGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSDHQQAFDQLQQQQETAADASRAGTSQTQSAAKSPQEKRKGAAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0964 247 MobiDBLite consensus disorder prediction 183 198 - -
Pvu11g0964 247 MobiDBLite consensus disorder prediction 89 167 - -
Pvu11g0964 247 Coils Coil 212 232 - -
Pvu11g0964 247 Pfam bZIP transcription factor 185 227 IPR004827 GO:0003700|GO:0006355
Pvu11g0964 247 Gene3D - 185 233 - -
Pvu11g0964 247 SMART brlzneu 182 240 IPR004827 GO:0003700|GO:0006355
Pvu11g0964 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Pvu11g0964 247 MobiDBLite consensus disorder prediction 81 209 - -
Pvu11g0964 247 PANTHER TRANSCRIPTION FACTOR TGA9 64 247 - -
Pvu11g0964 247 PANTHER TRANSCRIPTION FACTOR TGA9 64 247 - -
Pvu11g0964 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Pvu11g0964 247 SUPERFAMILY Leucine zipper domain 186 229 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0964 Pvu-Chr11 9554014 9557206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0964 157 247 bZIP Transcription Factor Family AT1G08320 70.652 6.17e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu11g0964 bZIP_1 2.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0964 K14431 - pvu:PHAVU_011G0937000 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1283 5 34782352 34789375 Pvu11g0964 11 9554014 9557206 PCT