Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0944 ATGGGCGGCGATGGTCGGCGACGTGATCGGAGAGACACCAGAGCACCTAAGAAGCGGAAGCTGAACCGCAGCCCCGAGGATGAGCTCGAAGCTAAATTAGGGTTCGATCTGTTTTCAGAGGGCGAGAAGCGACTCGGATGGCTACTCACTCTTGCATCCTCATCTGTTGAGGATGAAAACAGTTACAAAGTATACAGTTGTGTGGATCTTTACTTTGTTACACAGGATGGCTCTTCATTCAAGTCAAAATTCAGATTTCGGCCGTACTTTTATGTAGCTACAAAGGATAAAATGGAGATGGATGTTGAAACATACCTGAGAAGACGCTATGAAGGTCAGATTGCTGATATTGAAATTATAGAGAAAGAAGACCTGAATCTTAAAAACCATTTATCTGGGTTAAGAAAATCTTATTTAAAGCTTTCATTTGATACCGTACAACAATTGATGGACGTGAAGAGAGACCTCATGCCTTCAGTTGAAAGAAATAAGGCTAAATCTGATACCACAGAAGCCTTTGTGTCCATGTCAACAGAAAGAAGAGAACATAAACCTCAGGATTTTCTAGATTGCTTGACTGATCTTCGAGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAGTGATATACGGTGTGGCCAGTGGTATGATGTTGGAGTGTCTAATAATGGGGTAACACTTGAGAAGAGGACAGATCTTCTACAGCGCGCCGAAGTTCGTGTTTGTGCATTTGACATTGAGACCACGAAACTTCCATTAAAGTTTCCTGATGCTGACTATGATTTAGTTATGATGATTTCATACATGATAGATGGTCAAGGGTATTTAATCATAAATAGAGAGTGTGTTGGGGATGATATAGAGGATATAGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTACGTGACTTACAATGGTGATTTTTTTGATTGGCCATTCCTGGAACGAAGGGCAACCCATCTTGGATTAAATATGAGTGATGAATTGGGATTCAAATGTGACACAAATCAAGGGGAATGTCGTGCTAGATATGCTTGCCATTTGGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGGAGTCAAGGTCTGAAGGCTGTTACAAAAGCAAAGTTGGGATATGATCCATTGGAGGTGAATCCTGAAGACATGGTTCGATTTGCAAAGGAAAAGCCCCAGATGATGGCCTCCTATTCTGTTTCTGATGCTGTGTCAACTTATTACTTATATACAACATATGTTCATCCCTTTATTTTCTCTCTTTCAACCATTATACCTATGCCACCAGATGAGGTTTTGCGTAAAGGTAGTGGAACCCTCTGCGAAATGTTGCTTATGGTGCAGGCATACAAGGCCAATGTTATATGCCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAATAATCGTCTTCTTGAGAGTGAGACTTACATTGGTGGTCATGTGGAATGTCTTGAAAGTGGTGTTTTCAGATCTGATATCCCATCTAGTTTTACACTAGAGCCATCTGCTTATCAGCAACTGATCAACAACCTTGATCGAGATCTACAGTATGCTGTAACAGTGGAGGGTAAGATGGATTTGGAATCTGTTTCTAATTATAATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTACAATTACGAGATGCACCAACACGTGAAGAATGTCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGACTTCAGCCACCATCAATTGTTACTGATGAAGTCTGCACTGCATGTGATTTTAATCGTCCTGGAAAGACTTGCCTACGTAAGCTTGAGTGGGTCTGGCGTGGAGAAACATTCATGGCAAAGAAAAGTGACTACTATGCTTTAAAGACACAGATTGAATCAGAGTTTGTTGATGATTCTGAGAACAACAAATCCTTATCCCGTTATTCTGAGAAGAGGTCATCAAAATCTTTTCTTGACCTTCCCAAGACCGAGCAACAATTAAGACTGAAAGATCGTTTAAAGAAATACTGCCAGAAGGCGTATAAGCGGGTACTCAACAAACCTGTAACTGAAGTTCGTGAAGCGGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATACGAATATAAAGGTCTCAATAAGGTTTGGAAGGGAAAATTGTCAGAGGCCAAGGCTAGTGGAAATTCTATGAAGATCCAAGAAGCACAGGATATGGTTGTGCTCTATGATTCATTGCAACTTGCTCACAAGTGCATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTATTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATAATCCAGAATGCTCGCTTGCTAGTAGAAAAAATAGGAAAACCACTTGAACTAGACACGGATGGTATTTGGTGTGCACTACCGGGATCCTTTCCGGAAAATTTTACTTTTAAAACAGAAGACTCAAAGAAGAAGTTTACAATATCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAATGATCAATATCAGACACTCACAGATCCAATGAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTTTAATTAAAAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAACTTAAAGGTTTTGAGATCAAGCGAAGAGGTGAATTGAAGCTAATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCATGGTTCAACATTAGAAGAATGCTATTCAGCTGTTGCTTCAGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATAGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTAGCTGACTTTCTTGGAGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTATATAGTTGCAAGTGAACCAAAGGGCACACCAGTTAGCGAGCGTGCTATTCCTGTGGCAATATTTGAAACTGATGCTGAGGTAATGAAGTTCTATATCCGCAAATGGTGCAAGGTCTCGCATGAAGTTGCCATTCGTTCGATAATTGATTGGTCCTATTACAAGCAGCGGCTTAGTTCTGCAATTCAAAAAATTGTCACTATTCCTGCTGCAATGCAAAAGGTTTCAAATCCTGTCCCTAGGGTAGTTCATCCTGATTGGTTGCACAAGAAAGTTCGTGAGAAGGAGGACAGGTTTCGCCAACGGAAATTAGTTGATGTCTTTAAATCAATGAACAGGAATGAGCAGTCAAAAAAGCATAATGACTCAAATTGTGTCCCTCTTGTGATGGATGATGAGATTCTTAATGAGTTAGAGGACTTTGGAAACAAGAGTAGGAGTTCTACGCCCGGACCTAGACCAATTATAAGGCATTATGAAGCTAATAATGAACAAAATTCAAGGAAGCTCAGTGATCAACAAGATATGGAGCAAGAGCATAGTAAAGATAATAGCAGCAAGAAAAATGTACTTTCACCATTACAACAAAGTGAAACATGTGAAAATGTAGACAGAACTGTTGATTATCAGGGATGGCTTCAAGTAAAGAAGCGAATATGGAAAAATATCCTGGAAAGGAGAAAGAAGCAAAGATTGGAGAAATCAAAGACATCTAATCGTGTAAATGGTGTTTCTGAACAAATGAGTGGTAAAAGGAATCCTGGCAGAAGTCATGTCAGTTCGTATCTTAAAAGGCTTGAGGTAGACTTAACGAAGTGTCACTGGCAGATAATACAACTAGTTCCCAGTTCACTGATAGGCCAATTTTTTGCTTGGGTTGTTGTTGATGGGAGTATGCATAAGATTCCAGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCAAGATCCCCAATTAATGAAGAATTTATTGGTAAACGTGTTAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACTTATATGAGGTCTCGATTAATGAAATTCAATATGGGGAAGTAAGCAAAAAACTTGCAACTCTTCTAGCGGATCCTGATGTTGAGGGAATATATGAAACTAAGGTGCCACTGGACTTTAATGCAATAGTCCAGCTTGGTTGCGTATGTAAGGTGGACAAAACTGCTAATAAACGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACTACGACAGAATGTGTTTATCTTGAACAATCTTTATCCTTCTTTTATTTGTACCACAGCATCTCTGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATATCTGTTGTGGTGGTTAATCCCTATCAAAACAAAGATTTATCTCCGAATTTTCTTGAAAGACAATTTCATGATGCTTGCCAGACGTTGTCTATTGAGCCACCTCTGAGGAATGACATTAATTTTAAGGTGGACTATGTCGCACATGTCAAGGATGCTGAAACAGTGATGCAAAGAGCAATAAATGGTCACAGTCATGGGAGGGAAAATCATGTGCCTGTGGTTGCTGTCATTGAATGCCCAAATGTTCAATTAGTAAAATTGGGCATCCGAGCTCTGGATGATTTTCCATGCCTGAGTATTCCTTATAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAAACTGCTGGTAAAGTTGGAATGCAACGCTGTGCTGCATCAGTCCAATGGTTAAATCAAAGAATTGCTCTCTCAAGATATGCCCATGTACCACCGGGGAACTTTGAACTTGACTGGCTCATATATATGACAGATATCTTCTTTTCAAGAGCATTGCATGATAATCAACAGGTGCTTTGGATATCTGATGATGGCCTTCCAGATTTAGGTGGGATTAATGACGAACATAGCTGTTTTGTTGACGAGGTCCAACAACCTGTTCTTACATATCCTGGAGCTTATAGAAACTTAACTGTGGAGTTAAAGATACACCACCTGGCTGTAAATGCTCTACTCAAATACAGCCTAGTTAATGAAATGGAAGGAGGCACTCTATTAGGATTTGGTCATGAACATGATTCTGGAGCATTTTCAATGAATCATCAGAATGGTTTTGACGAGTCTACCTCTTGTGCACACGCCTTTCGAGTTCTTAAGCAGTTTATCCAGCGGTGCCTAACAGACACAGTGACATCAGGAAATGTTTATGCTGATTCAATTTTGCAGCATCTATATAGATGGCTTTGCAGCCCTAAATCAAAACTTCATGATCCCGCTCTCCACCAGCTACTCCATAAGGTCATGCAAAAGGTCTTCGCGTTGTTGTTGGCAGAGTTCCGCAAGTTAGGTGCTACAATTGTATTTGCAAACTTCACAAAGATTATTATAGACACAGGGAAATATGATCTGTCTAGAGCCAAAGCTTACTGTGACAGTTTGTTAAGAACTATCCAATCTAGAGATCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGTGCTCGTTGCTATTCATGGATCAGTATAACTATGGTGGTATACCAGCAAAATCTGATGAAGCCATGAATGATAAATCCCAAGTAGACATTATATCTAGCTGGAATATTGCTGAATACTTGCCAAAAAAAGTCCAAGACCATTTTGTTTACATCGTTTCCGAATTCATGTATATTCCATGGAATTATGCACAAAACCAAGCTCAAATCAGGGCCTCATTGCAGGATGGTGACACATGTACTCCATCAATAAGCATTGGAACTGCAGTGGCTTTTGAATCAGAAATAACAGAATATATCAAAGGACAGATTAGCTCTTACTTCGCCGACAAACTGCTAGGAATTGTTCACCATATTGGTCTTCATATGAAGCGAGTGAGCAGATCAGAAAACAACCAGAGTATTTCACCAGGCCCTGAATTACACAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTCTGTGCTGTCCTGGCCCTTGACCAAAGTGTGCAGCATGAAGTTTTGGTCTTGAGAAGGAATTTGCTCAAATATGTTGATGTCAAAGAGTTTGCTCCAGAAGCCGAGTTTCACGATCCTTGTCATTCCTTCGTCTTATCCAATGTCATATGCAGCTATTGTAATGACTGCAGAGACTTGAACTTGTGCCCGGATTCCGTTTCATTAACTGAGGAGTGGCGTTGTGCAGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAAAATGCTCTTCTTCAGATTGTAAGACAAAGAGAACGACTATACCACCTGCAAGATCTGGTGTGTATCAGGTGCCATCAGGTGAAAGCTGCACATTTGGCAGAGCAATGTGCATGTGCAGGCTCGTTTAGGTGCAAAGAAAGTGCAAATGAATTTCGTGAAAAGATGCAGCTTTTTTTTAACATAGCATCTCGTCAGAAATTCCAGCTTCTCGAAGAATGTACCTCTTGGATTTTAGAACACAGTTTAAATTGA 6666 0.401 MGGDGRRRDRRDTRAPKKRKLNRSPEDELEAKLGFDLFSEGEKRLGWLLTLASSSVEDENSYKVYSCVDLYFVTQDGSSFKSKFRFRPYFYVATKDKMEMDVETYLRRRYEGQIADIEIIEKEDLNLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPSVERNKAKSDTTEAFVSMSTERREHKPQDFLDCLTDLREYDVPYHVRFAIDSDIRCGQWYDVGVSNNGVTLEKRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDLVMMISYMIDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHLGLNMSDELGFKCDTNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLSTIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNRLLESETYIGGHVECLESGVFRSDIPSSFTLEPSAYQQLINNLDRDLQYAVTVEGKMDLESVSNYNEVKNAIMEKLVQLRDAPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSENNKSLSRYSEKRSSKSFLDLPKTEQQLRLKDRLKKYCQKAYKRVLNKPVTEVREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTEDSKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPMRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETDAEVMKFYIRKWCKVSHEVAIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVSNPVPRVVHPDWLHKKVREKEDRFRQRKLVDVFKSMNRNEQSKKHNDSNCVPLVMDDEILNELEDFGNKSRSSTPGPRPIIRHYEANNEQNSRKLSDQQDMEQEHSKDNSSKKNVLSPLQQSETCENVDRTVDYQGWLQVKKRIWKNILERRKKQRLEKSKTSNRVNGVSEQMSGKRNPGRSHVSSYLKRLEVDLTKCHWQIIQLVPSSLIGQFFAWVVVDGSMHKIPVSVPRVFYLNSRSPINEEFIGKRVNKTLPHGRHSYNLYEVSINEIQYGEVSKKLATLLADPDVEGIYETKVPLDFNAIVQLGCVCKVDKTANKRSLQEPWNLSELHMKTTTECVYLEQSLSFFYLYHSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPNFLERQFHDACQTLSIEPPLRNDINFKVDYVAHVKDAETVMQRAINGHSHGRENHVPVVAVIECPNVQLVKLGIRALDDFPCLSIPYNARDSQYQILGWQQTAGKVGMQRCAASVQWLNQRIALSRYAHVPPGNFELDWLIYMTDIFFSRALHDNQQVLWISDDGLPDLGGINDEHSCFVDEVQQPVLTYPGAYRNLTVELKIHHLAVNALLKYSLVNEMEGGTLLGFGHEHDSGAFSMNHQNGFDESTSCAHAFRVLKQFIQRCLTDTVTSGNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFTKIIIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDKSQVDIISSWNIAEYLPKKVQDHFVYIVSEFMYIPWNYAQNQAQIRASLQDGDTCTPSISIGTAVAFESEITEYIKGQISSYFADKLLGIVHHIGLHMKRVSRSENNQSISPGPELHRGDAALEFIKHVCAVLALDQSVQHEVLVLRRNLLKYVDVKEFAPEAEFHDPCHSFVLSNVICSYCNDCRDLNLCPDSVSLTEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCHQVKAAHLAEQCACAGSFRCKESANEFREKMQLFFNIASRQKFQLLEECTSWILEHSLN* 2222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0944 2221 Pfam Domain of unknown function (DUF1744) 1542 1910 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pvu11g0944 2221 MobiDBLite consensus disorder prediction 1199 1255 - -
Pvu11g0944 2221 Gene3D - 238 468 IPR036397 GO:0003676
Pvu11g0944 2221 SUPERFAMILY Ribonuclease H-like 65 490 IPR012337 -
Pvu11g0944 2221 SUPERFAMILY DNA/RNA polymerases 486 1125 IPR043502 -
Pvu11g0944 2221 Gene3D DNA Polymerase, chain B, domain 1 49 228 - -
Pvu11g0944 2221 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Pvu11g0944 2221 Pfam DNA polymerase family B 763 1083 IPR006134 GO:0000166|GO:0003677
Pvu11g0944 2221 CDD POLBc_epsilon 503 1132 - -
Pvu11g0944 2221 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 2216 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Pvu11g0944 2221 Gene3D Palm domain of DNA polymerase 761 947 IPR023211 -
Pvu11g0944 2221 SMART polmehr3 239 852 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pvu11g0944 2221 CDD DNA_polB_epsilon_exo 240 443 - -
Pvu11g0944 2221 SMART DUF1744_2 1524 1910 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pvu11g0944 2221 MobiDBLite consensus disorder prediction 1 27 - -
Pvu11g0944 2221 Gene3D - 951 1135 IPR042087 -
Pvu11g0944 2221 MobiDBLite consensus disorder prediction 1288 1315 - -
Pvu11g0944 2221 MobiDBLite consensus disorder prediction 1295 1314 - -
Pvu11g0944 2221 MobiDBLite consensus disorder prediction 1220 1244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0944 Pvu-Chr11 9178047 9201169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0944 5 2216 Core DNA Replication Machinery Family AT2G27120 65.975 0.0 2982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0944 K02324 - gmx:100812003 4073.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0944 11 9178047 9201169 Pvu11g0944 11 9178047 9201169 ECH