Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0934 ATGAAGGTGAACTTTTTTTCTTGGGCTCTTAAAAAACGTCATAGGAGAAACAAAAAATATTTGAGAACACGGTCCTTTGAAGGAACAATGAACGTAATTAATTTACGATTTTGCCACTCTTCCCAACTCCTCCATTCACCAAATCTCCTCTTCATTGTTCCTTCTTTGCAAACTCCAAACTTCAATCTGAGAAACCCAACAACCCCTTTAGCCATTTCCTGCAAAAATCGTTTCTTTTCTCCAATTCGTGCGTCCATGGCCTCCTCAGCCTCCGTCACGGACAACCAAACAAAGCCATTTTCCGTTCTCTTCGTGTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCCGAAGGAGTATTTACTGACTTAGTCAACAAAAAGAGCCTCAATTCGATGTTCAGAATTGATTCTGCTGGCACTATCAATTACCACGAG 435 0.4276 MKVNFFSWALKKRHRRNKKYLRTRSFEGTMNVINLRFCHSSQLLHSPNLLFIVPSLQTPNFNLRNPTTPLAISCKNRFFSPIRASMASSASVTDNQTKPFSVLFVCLGNICRSPAAEGVFTDLVNKKSLNSMFRIDSAGTINYHE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0934 145 Pfam Low molecular weight phosphotyrosine protein phosphatase 102 143 IPR023485 -
Pvu11g0934 145 Gene3D - 83 145 - -
Pvu11g0934 145 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 32 145 - -
Pvu11g0934 145 SUPERFAMILY Phosphotyrosine protein phosphatases I 98 144 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0934 82 145 Protein tyrosine phosphatase (PTP) family AT3G44620 65.625 4.72e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0934 K25307 - gmx:100797254 164.466