Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0933 ATGGACACTGAGGATCTAGCCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCAATACAACCACCAAACGCAGCACAAGTTTCAGCTCAGAAACCACCACCGTCACGCCCTCCACCTCCTCCCACTTTCTCCACCCGCCACTCCCCAACGCCAAGCCTCACGCGCCCTCCTCCGACCCCTGCGCCTCTTTCATCCACCGTACAAGGCCCCTGGCCTTCTCGCACCTCCGCTTCACGCGCCGCCTGGGCTCCGGCGACATGAGCGCCGTCTATTTGGCGGAGCCCAGGGAAGAAGGTGGCGGCGCGGTGTTCGCAGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGGAGAGCGAGGACAGAAAGGGAAATTCTGGAAATGTTGGATCACCCGTTCTTGCCCACGCTCTACGCGTCCATCCACGCGCCAAAATGGCTCTGCTTCCTAACGCCGTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCATCCGAAGTTTTGTTGGCACTTGAATATCTCCATATGCTGGGGATTATCTACCGCGACCTCAAACCCGAAAACGTGTTGATAAGATCTGACGGCCACATCATGCTCACCGACTTCGACCTGTCACTAAAATGCGACGATTCCACATCAACGGCACAGATAATCTCCGACCAAAACCCCCTTCCCACGCGCAACAACTGCCACGTGGAGGGCGCACGGGTGGCGTCGTCGTCGTGCATAATCCCGAGCTGCATAGTCCCGACGGCGTCGTGTTTCCAGCCGAGACGCAAGCGGAAGAAGAAGCAGAAGCTGCGTAGCGGGCCTGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCGATGTCATTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGGGAGGGCCACGGTAGTGCCGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCCTTCAAGGGCATGGACCACGAGCTAACCCTGGCGAACATTGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGGTTGTTCAGGGGCCATGAAGGAGCTTATATCGCAGTTGCTGGTTAAGGACCCCGCAAAGAGGCTAGGGTCGCTGATGGGGGCTTCTGCGATCAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTTAGGTGTACAACTCCACCCTTTCTTCCCCCACCTAACGCCAAAGCTGTATATGATGATGATCATCACACTTCCCCTGACATTTTCGTTGATTCTTATTAA 1338 0.5717 MDTEDLADDLHSLSFASTNTTTKRSTSFSSETTTVTPSTSSHFLHPPLPNAKPHAPSSDPCASFIHRTRPLAFSHLRFTRRLGSGDMSAVYLAEPREEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNNCHVEGARVASSSCIIPSCIVPTASCFQPRRKRKKKQKLRSGPAFVAEPMNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPGCSGAMKELISQLLVKDPAKRLGSLMGASAIKQHSFFDGVNWALLRCTTPPFLPPPNAKAVYDDDHHTSPDIFVDSY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0933 445 SMART serkin_6 76 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0933 445 MobiDBLite consensus disorder prediction 18 61 - -
Pvu11g0933 445 PANTHER FLIPPASE KINASE 1-RELATED 3 445 - -
Pvu11g0933 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pvu11g0933 445 ProSiteProfiles Protein kinase domain profile. 76 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0933 445 Pfam Protein kinase domain 79 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0933 445 Pfam Protein kinase domain 302 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0933 445 Gene3D Phosphorylase Kinase; domain 1 76 161 - -
Pvu11g0933 445 ProSitePatterns Protein kinases ATP-binding region signature. 82 107 IPR017441 GO:0005524
Pvu11g0933 445 MobiDBLite consensus disorder prediction 18 45 - -
Pvu11g0933 445 Gene3D Transferase(Phosphotransferase) domain 1 162 237 - -
Pvu11g0933 445 Gene3D Transferase(Phosphotransferase) domain 1 301 423 - -
Pvu11g0933 445 PANTHER OS11G0150700 PROTEIN 3 445 - -
Pvu11g0933 445 SUPERFAMILY Protein kinase-like (PK-like) 55 435 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0933 Pvu-Chr11 9085525 9088738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0933 4 445 AGC Kinase Gene Family AT3G44610 63.020 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu11g0933 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0933 K08286 - gmx:100811470 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1948 1 45456926 45462280 Pvu11g0933 11 9085525 9088738 ECH
Pvu7g2283 7 46168607 46174315 Pvu11g0933 11 9085525 9088738 ECH
Pvu11g0933 11 9085525 9088738 Pvu11g0933 11 9085525 9088738 ECH