Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0924 ATGGACTCACCAATGGAGTTTTGGGGTGTTGAGGTTAAGGTTGGGCAAACTGTGAAGGTTGATCCCATGGATCCAGTGAGTGCATACATACACATTTCCCAGGTTGCCCTTGGAGAGGCGAAGAAGGACAAGGCAAATGAAGCTGTGGTTCTGTACTTGAAAGTTGATGGCAAGAAGATTGTTCTGGGAACCCTTAAAAGGGATGACATCCCCCACCTTTCGTTGGATTTGGTTCTCGACTCTGAGTCCGAGCTTTCGCACTCTTCGAAAAGTGCTAGTGTCTTTGTCTGTGGATACAAAGTTCTAACTGACGAGGGTAACGTTGCTGACTTTTCTGATAGTGAAGAAGATGAGGAGGATCTTGTCTTAAATGGCCAAGAAAATGGGAAACCTGTGGTAAAAGCTGAAGGTGCAAAGGTTACCAAGCCCGCTAAATCTGCTCCTGCGGCAGTTGCATCAGTAAAACAAGTTAAGACTGTTGATCCGAAGAAAGATGAGGAGGATGATTCTGATTCTGACGAATCTGATGATGACCTTGATAGTGATGATGAATCTGGAACTTCTGATGAGATGGATGATGATAGCGACAGCGACGAGGCTGGTGAGAGTGATGAAGAGACCCCTGTGAAGAAGGTGGATCAGAGCAAGAAGAGACCAAATGTGTCTGCATCAAAATCTCCACCTTCTTCCAAGAAAGCTAAGACTGCTACTCCTGAAAAAACTGATGGGAAGAAAAATGTACATGTAGCAACTCCCTATCCTACGAAGAAAGGTGCAAAGACTCCCAAAAGTGCTACAAAAGGCCAGTCTCCCAATTCTGCTGGACAACTATCTTGCGGACCTTGTAAAAAGTCTTTCAGCAACGAAGCTGGTTTCCAACAACATAAGAAGGCTAAGCATGGTGGTCAGTGA 912 0.4518 MDSPMEFWGVEVKVGQTVKVDPMDPVSAYIHISQVALGEAKKDKANEAVVLYLKVDGKKIVLGTLKRDDIPHLSLDLVLDSESELSHSSKSASVFVCGYKVLTDEGNVADFSDSEEDEEDLVLNGQENGKPVVKAEGAKVTKPAKSAPAAVASVKQVKTVDPKKDEEDDSDSDESDDDLDSDDESGTSDEMDDDSDSDEAGESDEETPVKKVDQSKKRPNVSASKSPPSSKKAKTATPEKTDGKKNVHVATPYPTKKGAKTPKSATKGQSPNSAGQLSCGPCKKSFSNEAGFQQHKKAKHGGQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0924 303 MobiDBLite consensus disorder prediction 219 234 - -
Pvu11g0924 303 MobiDBLite consensus disorder prediction 204 218 - -
Pvu11g0924 303 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 299 - -
Pvu11g0924 303 MobiDBLite consensus disorder prediction 166 203 - -
Pvu11g0924 303 MobiDBLite consensus disorder prediction 262 292 - -
Pvu11g0924 303 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Pvu11g0924 303 ProSitePatterns Zinc finger C2H2 type domain signature. 279 300 IPR013087 -
Pvu11g0924 303 MobiDBLite consensus disorder prediction 137 303 - -
Pvu11g0924 303 Gene3D Nucleoplasmin core domain 2 107 - -
Pvu11g0924 303 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 299 - -
Pvu11g0924 303 SUPERFAMILY Nucleoplasmin-like core domain 5 79 IPR036824 -
Pvu11g0924 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 277 303 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0924 Pvu-Chr11 8870475 8873217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0924 5 300 C2H2 Transcription Factor Family AT5G03740 35.625 1.17e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0924 - - gmx:547649 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1318 5 35212603 35216025 Pvu11g0924 11 8870475 8873217 PCT