Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0909 ATGGAGAGGAACGAGAATTACAGTTCAGAGGAGGAATGCATGGAGGATTATCGGCGTGGAGGCTACCATGCCGTTCGAATCGGCGATGCTTTCAACAATGGCCGCTACGTCGTGCAGAACAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTTGCCTGGGACACTCTCAATTCGCGTTTTGTAGCCCTTAAAATACAGAAGAGTGCGCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCCGAGGGGGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGACAGCATGTCTGTATGGTTTTCGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCTCTCCACATGGTTAAAGAAATCTGTTTTCATATTTTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCAGAAAATGTGTTGCTTCTGTCACTGATAAATGCATCCAAAGATCCTAGGAAATCGGGTGCTTCACTCATCCTTCCTAATACGAAGGATAATGCTGCGTCTAATAATGGGACTCACCAAGAAAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAGGAAAATAAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGAAGGAAACTTCAGAGGAAGCTGAAGATTATAAAGGACCCGAGCAAGAAGATTGTGGGAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTTGAAAAGGATGTTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTCCATGAAAAAGAAGTTGCTGGCAGCTGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTATAAGCAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGACCATCTGGCATTGATGATGGAGCTTGTCGGGAAGATGCCTCCGAAGATTGCACTAGGTGGCCGCTATTCTCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACATCAACAATTTGAGATTCTGGCCAATGAATAAGGTGCTGATGGACAAGTATAATTTCAGTGAGCAAGACACAAAGGACATGGTTGATTTCCTTGTTCCAATGCTTGATTTCGTCCCAGAAATGAGACCAACTGCTGCTCAGTGCCTTAGTCATCCATGGATGAATGCAGGTCCTCGTACTCTTCAGCCCTCAATACCTACCGCCCAACCTGATGCCATGAATGAGGAATTGTCTGAAAGAAGGAAGAGGGAAGCTGCTGAAAAGGAGTCAGTGGAAATTGGTTTGAGGAACATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACTCCCAACCTCTAAAATCATCGAAATAG 1614 0.4294 MERNENYSSEEECMEDYRRGGYHAVRIGDAFNNGRYVVQNKLGWGHFSTVWLAWDTLNSRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGVPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINASKDPRKSGASLILPNTKDNAASNNGTHQENKILNGDPLKNQKRKIKRKAKVAQGFVGKETSEEAEDYKGPEQEDCGNDVKSSVESVEDKPDSSLSKDESTKTFEKDVSQGSHSHMSSSRSMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELVGKMPPKIALGGRYSREFFNRHGDLRHINNLRFWPMNKVLMDKYNFSEQDTKDMVDFLVPMLDFVPEMRPTAAQCLSHPWMNAGPRTLQPSIPTAQPDAMNEELSERRKREAAEKESVEIGLRNIAIKGTSEPLKDSQPLKSSK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0909 537 PANTHER SERINE KINASE-LIKE PROTEIN 5 535 - -
Pvu11g0909 537 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Pvu11g0909 537 MobiDBLite consensus disorder prediction 481 537 - -
Pvu11g0909 537 SUPERFAMILY Protein kinase-like (PK-like) 31 488 IPR011009 -
Pvu11g0909 537 Gene3D Transferase(Phosphotransferase) domain 1 119 475 - -
Pvu11g0909 537 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 535 - -
Pvu11g0909 537 MobiDBLite consensus disorder prediction 190 300 - -
Pvu11g0909 537 Pfam Protein kinase domain 311 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0909 537 Pfam Protein kinase domain 36 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0909 537 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Pvu11g0909 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pvu11g0909 537 SMART serkin_6 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0909 537 MobiDBLite consensus disorder prediction 494 511 - -
Pvu11g0909 537 MobiDBLite consensus disorder prediction 193 216 - -
Pvu11g0909 537 MobiDBLite consensus disorder prediction 240 289 - -
Pvu11g0909 537 ProSiteProfiles Protein kinase domain profile. 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0909 537 CDD STKc_SRPK 25 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0909 Pvu-Chr11 8632680 8636990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0909 6 523 EF-hand Containing Proteins AT5G22840 65.900 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pvu11g0909 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0909 K08832 - gmx:100790060 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1331 5 35346707 35352064 Pvu11g0909 11 8632680 8636990 PCT