Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0908 ATGGAGGAAATCTCATATTCTGATAAGTACTTCGATGATGCTTATGAATATAGACATGTGATTCTGCCTCCTGAAATCGCCAAGCTTCTTCCCAAAAATCGACTTCTCTCTGAAAAAGAGTACAGGGCGATTGGGGTTCGGCAGAGCCGTGGGTGGGTTCATTACGCAATTCATCGACCTGAGCCACAAATACTCCTTTTCAGGAGGCCTTTGAATTATCAGGCCCAACAGGAAAACAAGGCCCAAGATCAGGCCCAGGACCAAACTGTTATACAAATCTCAGAATAG 288 0.4479 MEEISYSDKYFDDAYEYRHVILPPEIAKLLPKNRLLSEKEYRAIGVRQSRGWVHYAIHRPEPQILLFRRPLNYQAQQENKAQDQAQDQTVIQISE* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0908 95 SMART CKS_2 3 72 IPR000789 GO:0016538
Pvu11g0908 95 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Pvu11g0908 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Pvu11g0908 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Pvu11g0908 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Pvu11g0908 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Pvu11g0908 95 SUPERFAMILY Cell cycle regulatory proteins 2 82 IPR036858 GO:0016538
Pvu11g0908 95 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Pvu11g0908 95 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 89 - -
Pvu11g0908 95 Gene3D - 1 84 IPR036858 GO:0016538
Pvu11g0908 95 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0908 Pvu-Chr11 8600096 8600847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0908 1 82 Core Cell Cycle Gene Families AT2G27970 79.268 4.17e-46 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0908 K02219 - nnu:104604585 152.91