Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0900 ATGGAATTGATGTTGGTGCCTCCACCATGGCTGGAACAACTATTGTCCACCACATTCTTCACCATGTGCAAAACTCACATCAACACACCCAGAAACGAATGCAACATGTATTGTCTTGATTGCAAGGACCACTCCTTTTGTTTTTATTGCAAACAATCTTGGCACAAGGATCATCAAGTAATTCAAATAAGGAGGTCGTCGTATCATAATGTTGTGAGGGTATCAGAGATTCAGAAGGCTTTGGATGTCAGTGGAGTTCAGACTTATGTGATCAACAGTGCTAGAGTTCTTTTCCTGAATGAGAGGCCTCAGAATCAACCAAAAACCAATAATGTGGTTGGTAGTGGAAAAACCAACTCCCATTTCTGTGAAATTTGCAGAAGGAATCTCCTGGATCCTTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTAGGAACAAAGAATAATGGGAATGGTGGTAGCTTTGTCTTGAGCACAAAGAAAGAGGAAGAAATAGGGAGAATGCATGAAGGAATGGGAAGAAGGTTGGCATCAAAGGAAGAATTGCGTGAAGGAAAGCACAAACAAGTGTACCAAAGCACGTCTTCTAATTCAAATCTAAGGGCATCACTAGAACATGTTTGTTCAAATTCAAGGAGAAGAAAAGGGGTACCTCATAGGGCACCTTTAGGTCCATAA 678 0.4115 MELMLVPPPWLEQLLSTTFFTMCKTHINTPRNECNMYCLDCKDHSFCFYCKQSWHKDHQVIQIRRSSYHNVVRVSEIQKALDVSGVQTYVINSARVLFLNERPQNQPKTNNVVGSGKTNSHFCEICRRNLLDPFRFCSLGCKLVGTKNNGNGGSFVLSTKKEEEIGRMHEGMGRRLASKEELREGKHKQVYQSTSSNSNLRASLEHVCSNSRRRKGVPHRAPLGP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0900 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 223 - -
Pvu11g0900 225 MobiDBLite consensus disorder prediction 189 206 - -
Pvu11g0900 225 MobiDBLite consensus disorder prediction 168 188 - -
Pvu11g0900 225 Pfam PLATZ transcription factor 64 143 IPR006734 -
Pvu11g0900 225 MobiDBLite consensus disorder prediction 168 225 - -
Pvu11g0900 225 SUPERFAMILY B-box zinc-binding domain 20 70 - -
Pvu11g0900 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0900 Pvu-Chr11 8469922 8471622 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu11g0900 PLATZ 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0900 - - gmx:100787414 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0900 11 8469922 8471622 Pvu11g0900 11 8469922 8471622 ECH