Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0884 ATGGCGGTCGTCGGCGGCGGCAGTGGCGGTGGCGGTGGCGGTGGCAGTGTCAGCACCATTCGCGTGGCGCCTAAATCTAGTGTTTTCTTGCAACAATGGTGGCTTGTCAATCAACGCAACGGTTTAGCCGTTGGCGGGGTTGCTTCCAGCGAGAGAGGTAGAGAAAGAGTGTTTTTGTCCACCGTCATTGCAGAGAGAGAAGAGGCCAATGTCCTACATACTCAAGATGGCATCGTTATTATTTTCCGTGGTTTCATCAACACCTCTCGTTCATCTCAAAATGGCGTCTCCTTAGAGGTTTGTCAACACTTCCTGGTTGGATTTCCTCACGATTGGAAGAAGTATTCACGTCGTAGTTTTGGTGACTCTACTGCTTCTTCAATTGATAACAAGAAACGTGAATGTAACAATAGTGAAAAACGAATCCCAGTTGAAAACAAAGCCAGTGTTGAAAGGAAAGCCAGTGTTGAAAGCCAAACCAATGGTCAATCCTTGATCGGTATGCATGATCGGACAGGCCCTTCTGGAAAAAACATCATTAAACCTCCGAAAACTCCAACTTCGGCCTATAAAAGGAAAGCTAGTACACAAAAGATAGGGCTGGATGCCAACAATTCATTAAGTAGGAGGGTAACGAGAAGCATTTCCAAAACTAGTCACACTATGCCGGAAGAAGACGAGAAAGATCCAATAGCCAAAAATATTTTTCCAATAGCCGATCTTATTTCTCCAGTTAGGAGATCTCCCAGGTTATATAGTTGTAAATAA 768 0.4479 MAVVGGGSGGGGGGGSVSTIRVAPKSSVFLQQWWLVNQRNGLAVGGVASSERGRERVFLSTVIAEREEANVLHTQDGIVIIFRGFINTSRSSQNGVSLEVCQHFLVGFPHDWKKYSRRSFGDSTASSIDNKKRECNNSEKRIPVENKASVERKASVESQTNGQSLIGMHDRTGPSGKNIIKPPKTPTSAYKRKASTQKIGLDANNSLSRRVTRSISKTSHTMPEEDEKDPIAKNIFPIADLISPVRRSPRLYSCK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0884 255 MobiDBLite consensus disorder prediction 120 195 - -
Pvu11g0884 255 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 22 142 - -
Pvu11g0884 255 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 190 254 - -
Pvu11g0884 255 MobiDBLite consensus disorder prediction 127 152 - -
Pvu11g0884 255 Pfam SANTA (SANT Associated) 28 115 IPR015216 -
Pvu11g0884 255 MobiDBLite consensus disorder prediction 209 228 - -
Pvu11g0884 255 MobiDBLite consensus disorder prediction 153 168 - -
Pvu11g0884 255 PANTHER MIS18-BINDING PROTEIN 1 190 254 IPR039110 -
Pvu11g0884 255 PANTHER MIS18-BINDING PROTEIN 1 22 142 IPR039110 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu11g0884 SANTA 3.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0884 - - pvu:PHAVU_011G086100g 491.115