Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0866 ATGAATTCTGCAATCCATAGATCCGGGTACTGTAGCGATGGAACATACCGGTCTCAAAGGCCTTCCTTGGTTCTCCCAGACAACCCCAACCTCTCACTCGTTTCGTTTCTCTTCCAAAGTGTTTCTTCTTTTCCATCCAAAACCGCTCTCGTAGACGCCGACTCTTCCCAAACCCTCACCTTCGCGCAGCTAAAAGCCCGAGTCGCAACCCTCGCCCATGGTTTCCTCAAACTAGGCATAAAGAAAAACGACGTCGTCCTCCTCCTCGCTCCCAACACCATCCACTTCCCCGTCTGCTTCCTCGCCGCCACTGCCATCGGAGCCATCGTCTCCACCGCCAACCCCATTTACACCGTCCACGAACTCTCCAACCAAGTCAAAGATTCCAACCCCAAGCTCGTCATCACTGTCCCTGAACTATGCGACAAAGCAAAGAACCTCAACCTCCCCGCCGTCATTCTCAGCACCAACAACCTTCAAAACCCAACTAAAAACGTGTCAGGGAAAATCACGAGTCTGGAAGCGGTGATGGAGATGGCGGGGCCGGTGACGGAGCTTCCGGAGAGCGGCGTTAAGCAGGGGGACACGGCGGCGCTGCTGTACTCCTCGGGGACCACGGGGCTGAGCAAAGGCGTGGTCCTGACGCATGGGAACTTCATCGCGGCGTCGGTGATGATCAGCATGGACGACGACCTGGCCGGGGAGGTAAACGACGTGTTCCTCTGTGTTTTGCCGATGTTCCACGTGTTCGGGCTGGCGGTTGTGACGTACACGGCGCTGCGGCGAGGGAGCGCGGTGGTGTCGATGGGGAAGTTCGAGCTGGAGGCGTTTCTAAAAGCGATTGAGAAGCATAGAGTGACGAAGTTGTGGTTGGTGCCTCCGATCCTGCTTGCTATGGCGAAACAGAGTGTGGTCCAGAGCTATGATCTGTCTTCGTTGAAGCGGATAGGTTCCGGTGCCGCTCCTTTAGGGAAAGAGTTGATGCAAGAATGTGGCAGGCGTTTTCCTCATGTAGCCATTTGTCAGGGCTATGGAATGACAGAGACTTGCGGCATTGTTTCTGTGGAGAATCCAAGAGCGGGGATTCGTCATACTGGGTCGACGGGGATGCTGGCTTCGGGAGTAGAAGCTCAAATAGTGACTGTGGATACACAAAAGCCTCTCCCTCCTACACAGTCCGGGGAAATATGGGTGCGAGGTCCTAACATGATGAAAGGTTATCACAACAATCCACAGGCCACGAGATTGACAATAGATGAAAAGGGGTGGGTGCATACAGGAGATATTGGATATTTTGATGAAGATGGACAACTTTATGTGGTAGACCGTATCAAAGAACTAATCAAGTACAAAGGTTTTCAGGTTGCACCAGCTGAACTTGAAGGCCTTCTCATTTCTCACCCTGAAATACTAGACGCTGTTGTTGTTCCATATCCCGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGCTCACCCAATAGTTCGCTGACTGAAGAAGAAATTAAGAAGTTTATTGCTAATCAGGTTGCACCGTTCAAAAAATTGAGAAGGGTGACATTCATAAGTAGTGTTCCAAGGACATCTTCAGGAAAAATTCTTAGAAGAGAGATCACTGCGAAAGCACGATCCAAAATATAA 1647 0.5124 MNSAIHRSGYCSDGTYRSQRPSLVLPDNPNLSLVSFLFQSVSSFPSKTALVDADSSQTLTFAQLKARVATLAHGFLKLGIKKNDVVLLLAPNTIHFPVCFLAATAIGAIVSTANPIYTVHELSNQVKDSNPKLVITVPELCDKAKNLNLPAVILSTNNLQNPTKNVSGKITSLEAVMEMAGPVTELPESGVKQGDTAALLYSSGTTGLSKGVVLTHGNFIAASVMISMDDDLAGEVNDVFLCVLPMFHVFGLAVVTYTALRRGSAVVSMGKFELEAFLKAIEKHRVTKLWLVPPILLAMAKQSVVQSYDLSSLKRIGSGAAPLGKELMQECGRRFPHVAICQGYGMTETCGIVSVENPRAGIRHTGSTGMLASGVEAQIVTVDTQKPLPPTQSGEIWVRGPNMMKGYHNNPQATRLTIDEKGWVHTGDIGYFDEDGQLYVVDRIKELIKYKGFQVAPAELEGLLISHPEILDAVVVPYPDDEAGEVPIAYVVRSPNSSLTEEEIKKFIANQVAPFKKLRRVTFISSVPRTSSGKILRREITAKARSKI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0866 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 547 - -
Pvu11g0866 548 CDD 4CL 25 539 - -
Pvu11g0866 548 Gene3D - 14 445 IPR042099 -
Pvu11g0866 548 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 8 547 - -
Pvu11g0866 548 Pfam AMP-binding enzyme 39 450 IPR000873 -
Pvu11g0866 548 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Pvu11g0866 548 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Pvu11g0866 548 Gene3D - 446 547 IPR045851 -
Pvu11g0866 548 SUPERFAMILY Acetyl-CoA synthetase-like 23 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0866 Pvu-Chr11 8078425 8081905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0866 5 548 Monolignol Biosynthesis Gene Families AT4G05160 67.831 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0866 K01904 - gmx:100808944 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1357 5 35684228 35688356 Pvu11g0866 11 8078425 8081905 PCT