Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0863 ATGGTGTCCGACGCTAGCAAGAAAAAGGCTGCACAGAAGAAGGCCGCCGCCGCCGCTAAAAGAGGTGGAAAGGCCGCCGCCGCTGCTGTCGTCGCCGCTGCTTCTTCCAAAGCCGCCGAGAAGGCTGCCAACGGAATTGCTGATATGCATATATCGGATCGGACCTGTACTGGAGTCCTCTGTTCACATCCTCTTTCTAGAGATATTCGAATAGAATCTCTATCTGTTACATTCCATGGTCATGATCTCATTGTTGATTCCGAACTGGAGCTTAATTATGGAAGGCGTTATGGTTTACTTGGGTTAAATGGTTGTGGAAAATCTACACTGCTTACAGCCATTGGTCATCGGGAACTTCCAATTCCTGACCATATGGATATCTACCACCTTACGAGGGAGATTGAAGCCTCTGACATGTCTGCTCTGGAAGCTGTCATAAGCTGTGACGAAGAAAGGTTGAAATTGGAGAAAGAAGTTGAACTTTTGTCTGCACAGGATGATGGAGGCGGTGAATCCCTGGAACGTGTTTATGAGCGATTGGATGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATCTTACATGGTCTAGGCTTTGACAAGCAAATGCAGGCAAAAAAGACACGTGATTTTTCTGGTGGTTGGAGAATGAGAATTGCATTAGCACGAGCCCTATTCATGAACCCAACCATTCTTCTACTCGATGAGCCAACCAATCATCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAAGTTTGAACGTATTCTGGTTGTGATTTCACACTCTCAGGACTTTCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAGCAAAAAACTGAAGCTTTATACTGGTAACTATGATCAATATGTTCAGACACGTTCTGAGCTAGAAGAGAACCAGATGAAACAGTATAAGTGGGAGCAGGAGCAGATTTCCTCGATGAAGGAATATATTGCTCGATTTGGTCATGGTTCTGCCAAACTAGCTCGCCAGGCACAGAGTAAGGAGAAAACATTGGCAAAAATGGAACGTGGTGGGCTTGCAGAGAAGGTGGTCAGGGACAAGGTTTTGGTATTCCGTTTTACTGATGTTGGAAAACTCCCCCCTCCTGTTCTCCAGTTTGTTGAGGTGGCATTTGGTTACACTCCGGATAACCTCATATACAAGAACATTGACTTTGGGGTTGATTTAGATTCTAGGGTTGCACTGGTTGGACCCAATGGTGCTGGGAAGAGTACACTACTGAAGCTAATGACAGGTGATTTGATGCCTAGTGATGGCATGGTTAGGCGCCATAATCATCTTCGGATTGCTCAATATCACCAGCATCTGGCTGAAAAGCTAGACTTGGAGATGTCTGCTCTACAGTATATGATTAGAGAATATCCTGGAAACGAGGAAGAGAAGATGAGGGCAGCGATTGGAAAGTTTGGCCTATCAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTGTCTGATGGGCAGAGGAGTCGAGTGATATTTGCTTGGTTAGCTTGGAGGCAGCCGCAAATGCTTCTTTTGGATGAACCAACTAATCATTTGGATATTGAGACAATTGATTCTTTGGCTGAGGCATTGAATGAATGGGACGGTGGCTTGGTGCTTGTGAGCCATGATTTCAGGCTCATAAATCAGGTGGCCCATGAAATATGGATATGTGCTAATCAAAGTGTGACTAGATGGGAGGGTGACATTATGGAATTCAAGGCGCATCTAAAGGCCAAGGCTGGTTTATCTGATTGA 1788 0.453 MVSDASKKKAAQKKAAAAAKRGGKAAAAAVVAAASSKAAEKAANGIADMHISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGHRELPIPDHMDIYHLTREIEASDMSALEAVISCDEERLKLEKEVELLSAQDDGGGESLERVYERLDALDAATAEKRAAEILHGLGFDKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLAEKVVRDKVLVFRFTDVGKLPPPVLQFVEVAFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLMPSDGMVRRHNHLRIAQYHQHLAEKLDLEMSALQYMIREYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWICANQSVTRWEGDIMEFKAHLKAKAGLSD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0863 595 Pfam ABC transporter 280 356 IPR032781 -
Pvu11g0863 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 309 IPR003439 GO:0005524
Pvu11g0863 595 Coils Coil 287 307 - -
Pvu11g0863 595 SMART AAA_5 93 295 IPR003593 -
Pvu11g0863 595 SMART AAA_5 405 593 IPR003593 -
Pvu11g0863 595 Pfam ABC transporter 396 527 IPR003439 GO:0005524
Pvu11g0863 595 Pfam ABC transporter 87 241 IPR003439 GO:0005524
Pvu11g0863 595 CDD ABCF_EF-3 380 571 - -
Pvu11g0863 595 Gene3D - 69 333 IPR027417 -
Pvu11g0863 595 Gene3D - 345 593 IPR027417 -
Pvu11g0863 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 316 IPR027417 -
Pvu11g0863 595 CDD ABCF_EF-3 69 286 - -
Pvu11g0863 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 595 IPR003439 GO:0005524
Pvu11g0863 595 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524
Pvu11g0863 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 574 IPR027417 -
Pvu11g0863 595 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 595 - -
Pvu11g0863 595 PANTHER - 1 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0863 Pvu-Chr11 8021682 8025179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0863 380 567 Calmodulin-binding Proteins AT2G36910 24.771 6.36e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0863 K06185 - gmx:100809491 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1359 5 35725070 35729511 Pvu11g0863 11 8021682 8025179 PCT