Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0862 ATGGGGGGAGTAAGAAGCAGCAGCAGGAAAATAAGGGTTGTGGGTGGTATTTTGAAGTTGAAGGGTGTGTTGGAAAAGCTTCAAAAGAGTGTCTTATTGAGGAGACATAAATCAAGTTTGTATGGAGGAGATTATGAAGAATTAGGAGATGACAGAAGGTGTGTGGCAGAAGATGTGAAAGAAGGACATTTTGTTGTGATTGCAAAGGCAAAGGATATTGGGGAGGAGGCAAAGAGATTGGTGGTTCCATTGAGCTGTTTAAAGAATCCAACATTCTTGAGGCTATTGGAAGAAGCAGCAGAAGAGTATGGGTTTGATCAACATGGTGCACTAACCATTCCTTGCAGGCCTAGTGAACTTGAGAAGCTATTGGTTTAG 378 0.4206 MGGVRSSSRKIRVVGGILKLKGVLEKLQKSVLLRRHKSSLYGGDYEELGDDRRCVAEDVKEGHFVVIAKAKDIGEEAKRLVVPLSCLKNPTFLRLLEEAAEEYGFDQHGALTIPCRPSELEKLLV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0862 125 Pfam Auxin responsive protein 42 124 IPR003676 GO:0009733
Pvu11g0862 125 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 23 124 - -
Pvu11g0862 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0862 Pvu-Chr11 8017793 8018413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0862 6 124 Calmodulin-binding Proteins AT3G43120 29.078 4.52e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0862 - K14488 gmx:102667608 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0862 11 8017793 8018413 Pvu11g0862 11 8017793 8018413 ECH
Pvu5g1361 5 35741390 35744469 Pvu11g0862 11 8017793 8018413 PCT