Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0848 ATGGCTTCTAAAACCCCACTCCCTCTTCAAGCCACCAACACAAAGCTACCATCTCTAAGGTCAAAGAAAGATCGCCACACCAAGGTGAATGGCAGAGAACGACGTGTTCTTTTGCCACCTTTGTGTGCTGCTCGCATCTTCCAACTCACTCGTGAGCTAGGTTACAAGACTCACGGAGAAACCATAGGGTGGCTTCTACGCCAGGCTGAACCCTCCATTATTTCTGCAACTGGCACTGGGATATCACCTTCCATGGTTGATGTAACATCATCATCACCATCTTCATCCTCACCGTCGTCACTACCCACACTTCCACTACCTTCTGAGGGTGATAACGTTGTTGGTCAACATGCAAGTTCGGTACATTTGTCAACAGACAACGAGATCAATTCAAAAGAGACGTTTCCACCTTTCGATTTTGATGTGTTTGCAAACTTTAATGTGGAATTTTCTGCTGCTGAGATCGAAATGCTCCAATCATTGATGACGAGGTTGGGCTGA 501 0.4631 MASKTPLPLQATNTKLPSLRSKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIISATGTGISPSMVDVTSSSPSSSSPSSLPTLPLPSEGDNVVGQHASSVHLSTDNEINSKETFPPFDFDVFANFNVEFSAAEIEMLQSLMTRLG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0848 166 Pfam TCP family transcription factor 21 117 IPR017887 -
Pvu11g0848 166 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 13 163 - -
Pvu11g0848 166 MobiDBLite consensus disorder prediction 84 106 - -
Pvu11g0848 166 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g0848 166 MobiDBLite consensus disorder prediction 84 114 - -
Pvu11g0848 166 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 163 IPR005333 GO:0003700
Pvu11g0848 166 MobiDBLite consensus disorder prediction 1 29 - -
Pvu11g0848 166 ProSiteProfiles TCP domain profile. 22 76 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0848 Pvu-Chr11 7809341 7809841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0848 23 101 TCP Transcription Factor Family AT5G08330 63.291 3.58e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu11g0848 TCP 9.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0848 - K16221 var:108322003 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1369 5 35860510 35861757 Pvu11g0848 11 7809341 7809841 PCT