Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0847 ATGATGATGAATCTTCCTAAGCAGACAAGGAAGGTTCCTTTTGTCATAGTTGTTGTATTAATAAGCTTCATTGTCGGGCCAAAGCTAGTTTTTGGTCAGACTACTGGTGGAGGTGGAGGAGGAGATGGTGGTAGCGCTGGCCTTGAGATATTCGCCCAAGAAGTATATCGTAGCATGTCCAATTATACATCTGTGTTCAAGAAAGCAATAAAACAAGAGTTGGGTTATTGCGTAGTTGATGTGGACGCTGATTGGAATGGGGCATTTAATTTCACCAAAGATCTTACCTTTTTGACCATTTGTGCCCAGCAATTGAAAGGAGATATTACACAACGCATGTGCACAGAAGCGGAAATACTAGCTTATGGGCAAAGTTTTGCTAGTGGGAAGTCAAGAACCAACTTCTTGAAGCCAAACATAAATTGTAATTTGTCCTCATGGGTTAATGGTTGTGAACCCGGATGGGCTTGTAAGGCTAATGAGAAAGTAAGCATTGACAGTGCCAAGAAGGAGATGCCTGTTAGATCTGTAGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCGTGGTCTCACTTGCATGATACCTTGCCCATTGGGCGCTTATTGTCCTATTGCACAACTCAATAAAACTAGTGGAGTATGTGAACCATATCGTTATCAGCTACCTCCTGGAAAGCCTAACCATACTTGTGGTGGGGCAGATATTTGGGCAGATATTACCAGTAGCAGTGAGGTATTCTGCTCATCAGGGTCTTTTTGTCCCTCTACAATCGTAAAAAATCCTTGCAATAAGGGGTATTATTGCAGAACAGGTTCTACTTCTCCAGAGAGGTGTTTCAAATTGGCAACTTGTGAGCCTAAGTCAGCGAATCAAAATATTACTGCATATGGTGTCTTGATTTTTGCTGGCTTGTGTTTTTTGCTTATTATCATATACAATTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAATACACGAGAACGGGCTGTTCAAAGTGTAAGAGAATCCCAAGCCCGTGAAAAATGGAAATCTGCGAAAGATATTGCTAAAAAGCATGCAGTAGGACTACAATCGCAACTATCACGTACTTTTTCACGAAAAACTTCAAAGAAGCCAGAGTTCAAAGGTTTTGGTTCTAAACATTCAGATTCTGCCATACCACCATCTGGTAAAGGCAAGAAAAAGGATAAAAACAATCTCTCAAAAATAATAAATGATATTGAGGAAAATCCCGATAATCCGGAGGGGTTTCATCTTCAGATAGGAGATAAAAATGTCAAAAAGCAAGCACCAAGGGGCAAACAATTACATACTCAAAGTCAAATTTTCAAGTACGCATATGGTCAGATTGAAAAAGAAAAGGCTTTAGCAGAACAAAACAAAAACTTAACCTTTTCTGGAGTAATTTCAATGGCTAGTGACATTGAGATTAGGAAGAGACCTACCATTGAAGTTGCTTTTAAAGATTTAACCCTCACTTTGAAGGGAAAAAACAAACATTTATTGAGATGTGTGACTGGTAAATTGTTTCCTGGTAGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACAACTGGGCAAGTTCATGTAAATGGTCAGGAATCTTCTATCAGATCATACAAGAAAATCATTGGGTTTGTCCCACAAGATGATATTGTGCATGGAAATTTGACAGTGGAGGAGAATTTATGGTTCAGTGCAAGATGCAGACTCTCTGCTGATCTACCAAAAGAAGAAAAGGTGTTGGTGGTTGAAAGAGTCATTGAGTCATTAGGTCTACAGGCAATACGAGATTCTTTGGTCGGTACAGTGGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGATTGGAAATGGTCATGGAACCTTCCCTTCTAATTTTGGATGAACCCACATCTGGCTTGGATAGCTCATCTTCTCAATTACTTCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGTGTAAACATATGTATGGTCCTTCACCAACCTAGTTACACCTTGTTCAAGATGTTTGACGATTTTATACTACTTGCAAAAGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTGGAAGAGTATTTCTCAAGCATGGGCATTAATGTCCCTGACCGCGTCAACCCTCCAGATTACTTCATTGACATTTTAGAAGGAATAGTAAAATTAAGCCCAAGCTTAGGAGTGACCTATAAACAACTACCTGTAAGATGGATGCTTCATAATGGGTACCCCGTGCCCATGGATATGCTGCAGAGTGTTGAAGGAATGGCCGCCGCAAGTGGTGAAGGCTCATCACGTGGAGCAGCAACTGCTGGACCGCATGAGGAAAATGCACCTTCTTTTGCTGGAGAACTTTGGCAGGATGTAAAGTGCAATGTTGAGATGAAGAAGGATATCCTTCACATTAACTTCTTAGCTTCAAATGATCTGTCCAATCGGGTTACACCAGGAGTGTTCAACCAATACAAATACTTTCTTGGAAGACTTGGTAAGCAAAGACTAAGAGAAGCTAGAACACAGGCTGTGGATTTCTTGATTTTGCTACTAGCTGGCCTTTGCTTAGGTACACTTGCCAAAGTGAGTGACGAATCATTTGGAGCAACTGGATACACATACACTGTAATAGCAGTATCACTCCTTTCTAAGATTGCGGCTTTGAGATCATTCTCATTGGATAAGTTGCACTATTGGCGGGAAAGTTCTTCAGGCATGAGCAGTTTGGCTTACTTTCTATCAAAGGACACTGTTGACCATTTTAGCACAGTTATCAAGCCACTGGTTTACCTTTCCATGTTCTATTTCTTCAACAATCCAAGATCATCAGTCACAGATAACTATATGGTTCTACTATGTTTAGTCTATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTTTTACAGCCAGGTCCAGCCCAACTGTGGTCAGTGTTACTTCCTGTAGTTTTGACTCTTGTAGCAACCTATGAGAATGAAGATGATAGCAAATATGTTAAATATTTATCAGATTTGTGCTACACTAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCAAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCACTTTATTCTTCTGGCTATGATCTTAAACATTGGTACCAATGCTTAGGCCTTCTTATCGTGATGGGAATAATTAGTCGCATGCTTGCATTTTTCTGCATGATAACCTTCCAAAAGAAATAA 3306 0.4032 MMMNLPKQTRKVPFVIVVVLISFIVGPKLVFGQTTGGGGGGDGGSAGLEIFAQEVYRSMSNYTSVFKKAIKQELGYCVVDVDADWNGAFNFTKDLTFLTICAQQLKGDITQRMCTEAEILAYGQSFASGKSRTNFLKPNINCNLSSWVNGCEPGWACKANEKVSIDSAKKEMPVRSVDCQPCCEGFFCPRGLTCMIPCPLGAYCPIAQLNKTSGVCEPYRYQLPPGKPNHTCGGADIWADITSSSEVFCSSGSFCPSTIVKNPCNKGYYCRTGSTSPERCFKLATCEPKSANQNITAYGVLIFAGLCFLLIIIYNCSDQVLATRERRQANTRERAVQSVRESQAREKWKSAKDIAKKHAVGLQSQLSRTFSRKTSKKPEFKGFGSKHSDSAIPPSGKGKKKDKNNLSKIINDIEENPDNPEGFHLQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALAEQNKNLTFSGVISMASDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLFPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVHVNGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGINVPDRVNPPDYFIDILEGIVKLSPSLGVTYKQLPVRWMLHNGYPVPMDMLQSVEGMAAASGEGSSRGAATAGPHEENAPSFAGELWQDVKCNVEMKKDILHINFLASNDLSNRVTPGVFNQYKYFLGRLGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESSSGMSSLAYFLSKDTVDHFSTVIKPLVYLSMFYFFNNPRSSVTDNYMVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYENEDDSKYVKYLSDLCYTKWALEAFVISNAKRYAGVWLISRCGALYSSGYDLKHWYQCLGLLIVMGIISRMLAFFCMITFQKK* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0847 1101 MobiDBLite consensus disorder prediction 365 404 - -
Pvu11g0847 1101 ProSitePatterns ABC transporters family signature. 632 646 IPR017871 GO:0005524
Pvu11g0847 1101 SMART AAA_5 517 718 IPR003593 -
Pvu11g0847 1101 Gene3D - 480 731 IPR027417 -
Pvu11g0847 1101 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 1098 - -
Pvu11g0847 1101 Pfam ABC transporter 511 660 IPR003439 GO:0005524
Pvu11g0847 1101 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 732 IPR003439 GO:0005524
Pvu11g0847 1101 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 41 1098 - -
Pvu11g0847 1101 CDD ABCG_EPDR 489 715 - -
Pvu11g0847 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 728 IPR027417 -
Pvu11g0847 1101 Pfam ABC-2 type transporter 689 1101 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0847 Pvu-Chr11 7788293 7793914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0847 518 713 Calmodulin-binding Proteins AT2G36910 27.442 1.05e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0847 - - gmx:100809312 1976.44