Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0835 ATGAAGCCACAGCTCAAAATTGGTCTTGTTTTAGTTATTAGCTTGCTTTGGATTCAGAGCTCATTTTGTGATGAAGCTTCTGCTGCCTCTAACCTAAACAAGTGGAGATGTAGATGTTCTTTTGGAGGGAATCATAGCTTCTCTCTGGCTAATTGTTCTAAGTCATGTGATTGCCACTCAGATGCTGACGAGAGTGCATCCATATGGACATGCATATGTGCTTCCAATGGGTTTCCTCAAGTGGCAGCAGATGGTCATAGCCCTAATTGCTTTAACGCTTGCAACTGCACCTGGGGAACTGTCAGCAATCTGGGAGGTTCTAAGAAACATGTTTCCATCAAGATTGTTGTAGTTATCCTATTAATATGTGTTATATGTACAACCATGGCGTTTCTTGTCTCACTCTTATGCCATGTATACAGAAGGGACAGATGTACTATTCAATCACCCGTATTCTCAACATATAAGGAAACAAGTAGTGGTAGTACCACCAACTTAATTAGTCATAGGTCAGGGGCTTCTTCAGTGCCTGAAACAAAATTTGCAATAAATTCTCCAATTTGTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACGTATCATGGAAATATTTTTCCATTTTCCTTAGCTGAACTGGAAAATGCCACTGAAAACTTTTCATCTTCCAACCTAATTGGATTAGGTGGAAGCAGTTATGTATACCATGGTCGGCTGAAAGATGGTAGCGATGTGGCGGTTAAAAGACTAAAAGATCAAGGAGGGCCAGAAGCAGACTCTTCATTTTTCAATGAGATTGAACTATTATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTGGGATACTGTTCAGAGTTAAAAGGAAAACATGTTCAGAGGTTACTTGTATTTGACTACATGGCTAATGGAAATTTGAGGGACTGTTTAGACGGAGTTTCTGGAAAACATATAGATTGGGCTACTCGTGTAATGATTGCGTTAGGTTCTGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGCATGGCCAAAAACCTGAGATCTGATGACCTCCCTAGCTGTTCTAATTCTCCAGCAAGAATGCAGGGTACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAGAGCTTCTCTTGAGTCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAGCCCATCCATAAATCTACTGGCAAAGAGGAAAGCCTTGTTATATGGGCTACTCCTCGCTTACAGGATAGTAGGCGAGTAATAACGGAGCTGGTTGATCCACAATTAAAAGGAAATTATACAGTAGAAGAGGTGCAGGTGATGGCATACTTAGCAAAGGAGTGTTTGCTGCTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAGATTCTTCTAAGTATTTCCCCGGGAAAATCTAGGAGGAGAAGAAACATTCCAGGCAGCCTCTTTCAGGAACTGCAGGATGCAGAAAAGAAAAGGCAAGCCACACCCGGTAAATTTCCAACGCATAGTTCACTGCCAATATATATTGATCATAGTCTTTCTGTTGAGGACAAAAGTAAAGAAGCAGATCCAGTTTCAGCTGAGTATATGGAGAGTTTGATCCTCTTGTCTTCAAAATCTGATAGCTCTTACGTATCAGAAGAGGAAATAGTAGACTTAACTGAGCCTAGGTTTGAATCGTTTTGCATCACAACTGGCAAAGCCCCTTGA 1839 0.4122 MKPQLKIGLVLVISLLWIQSSFCDEASAASNLNKWRCRCSFGGNHSFSLANCSKSCDCHSDADESASIWTCICASNGFPQVAADGHSPNCFNACNCTWGTVSNLGGSKKHVSIKIVVVILLICVICTTMAFLVSLLCHVYRRDRCTIQSPVFSTYKETSSGSTTNLISHRSGASSVPETKFAINSPICHITGCFQKASFLFGSPKETYHGNIFPFSLAELENATENFSSSNLIGLGGSSYVYHGRLKDGSDVAVKRLKDQGGPEADSSFFNEIELLSRLHHCHLVPLLGYCSELKGKHVQRLLVFDYMANGNLRDCLDGVSGKHIDWATRVMIALGSARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSTGKEESLVIWATPRLQDSRRVITELVDPQLKGNYTVEEVQVMAYLAKECLLLDPDTRPTMSEVVQILLSISPGKSRRRRNIPGSLFQELQDAEKKRQATPGKFPTHSSLPIYIDHSLSVEDKSKEADPVSAEYMESLILLSSKSDSSYVSEEEIVDLTEPRFESFCITTGKAP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0835 612 ProSiteProfiles Protein kinase domain profile. 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0835 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Pvu11g0835 612 Gene3D Transferase(Phosphotransferase) domain 1 308 523 - -
Pvu11g0835 612 SUPERFAMILY Protein kinase-like (PK-like) 207 506 IPR011009 -
Pvu11g0835 612 SMART serkin_6 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0835 612 PANTHER OS01G0253100 PROTEIN 2 606 IPR045271 GO:0004714|GO:0006468
Pvu11g0835 612 CDD STKc_IRAK 233 509 - -
Pvu11g0835 612 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 606 - -
Pvu11g0835 612 Gene3D Phosphorylase Kinase; domain 1 202 307 - -
Pvu11g0835 612 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Pvu11g0835 612 Pfam Protein kinase domain 229 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0835 Pvu-Chr11 7607440 7613679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0835 1 610 Receptor kinase-like Gene Family AT2G28250 50.569 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Pvu11g0835 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0835 - - gmx:100817870 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1382 5 36065879 36070796 Pvu11g0835 11 7607440 7613679 PCT