Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu11g0831 | ATGGCTTCTGATTGTTCAAGATTTGTAAGATTTCAAGATGACCCTGAATTGGTAAAATTGCCGACAACAAACAGTGGCAAGGGAATCAGGCGCAATGGAACACGATTAGTTGAGACAAGGGGTAAAAAGGGTCTGAAGGAGACAAGGAAGTTCTTGAAGGCTAGAGTATTGTCGAGAGTATTCTCAGAGGATTATGAGAGAGTTAGAAAAAAAACATTATTAGATCCCCGGGGACAAACCATTCACCGATGGAACAAAATTTTCTTGGTAGCATGTTTAGTTTCTTTGTTTGTGGACCCTCTATTCTTTTATTTGCCACTAGTTCGACATGAAGTGTGCATTGATATTGGAACAGCTCTTGAAGTTTTCCTCACAATGATAAGATCATTGGCAGATGTGTTTTACATGATTCAGATTCTCATGAAGTTTCGAACGGCTTATGTTGCTCCTTCTTCTCGTGTATTTGGGAGGGGAGAACTTGTCATAGACACTACCAAGATAGCTACTAGGTACCTGAGAAAGTGTTTTGGGCTAGACTTCATTGCTGCACTGCCTCTTCCTCAGGTGTTAATTTGGATTGTGATCCCCAATCTTGGAGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGCTTTATCATCATTTTCCAATATTTACCAAGGCTGTTTCTGATTTTTCCACTTTCATCCCAAATTGTAAAAGCTACGGGGGTTGTGACAGAAACAGCATGGGCAGGGGCCGTTTACAACTTGGTTCTGTACATGTTGGCTAGCCATTTTTTAGGAGCTAGCTGGTACCTTCTATCAATTGAACGACAAGAAGCGTGCTGGAGGAGTGTCTGCGATATGGAGCCATCTTGCCAATATGGATTCTTTGACTGCAAAAGGGTTGAAAACTCCCTCAGGGTCTCCTGGTTTATAGCAAGTAATATCACAATTTTATGCTCACCAAAGGCTAACTTTTATCAGTTTGGTATATACGGTGATGCTGTGACATCCCAAGTTACTATCTCATCATTCTTTCACAAGTACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATCTGAGTTCATTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTTGTTGCAACCCTTGGACTAGTTCTTTTTGCATTGCTTATTGGCAATATGCAGACATATCTCCAATCAACAACTGTTCGCTTAGAAGAGTGGAGGGTGAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCCTCAGAACTTAGACAATCTGTGCGCAAATATAACCAATATAAATGGCTGGCCACACGAGGGGTAGATGAAGAAGCTCTTCTCAAAGGACTTCCTGCTGATCTTCGGAGGGACATCAAGCGCCACCTTTGTCTCGAACTAGTTCGACGAGTGCCACTGTTCGATCAAATGGACGAGAGAATGCTTGATGCAATATGCGAGAGGCTGAAGCCGGCACTGTGCACGGAGAACACATACCTAGTTCGCGAGGGCGATCCCGTGAACGAAACTCTCTTCATAATCAGAGGCCACCTGGATTCCTACACCACCAACGGAGGCCGCACCGGTTTCTTCAACTCGTGCCGCATAGGCCCCGGCGACTTCTGCGGCGAGGAGCTGCTCACATGGGCCCTGGGCCCACGGCCCAGCTTCATCCTCCCCTCCTCCACCCGAACCGTCAAGGCCATCTCCGAAGTGGAGGCCTTCGCCCTCATAGCCGAAGACCTCAAGTTCGTGGCGTCACAGTTCAGAAGACTACACAGCAAACAACTGAGACACAAGTTCAGGTTTTACTCGCACCAGTGGAGAACGTGGGCTGCATGTTTCATACAAGCTGCATGGAGACGCTACAAGAAGCGAAAGGAAGCTGCAGAACTGAGAGCTTTGAGCTACGTTCAGTCTAAGAGAGAGGGTGAGAGCGTAGGGTTGGTTGCGTATGGTACGAGGATGACTAGGAAGGGTACTGTGCATTCTGATGAAGTTGTCAACTCTTTGCAGAAGCCAGAAGAACCAGATTTTTCTGTTGGTGAGTGA | 2058 | 0.4577 | MASDCSRFVRFQDDPELVKLPTTNSGKGIRRNGTRLVETRGKKGLKETRKFLKARVLSRVFSEDYERVRKKTLLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVRHEVCIDIGTALEVFLTMIRSLADVFYMIQILMKFRTAYVAPSSRVFGRGELVIDTTKIATRYLRKCFGLDFIAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAVYNLVLYMLASHFLGASWYLLSIERQEACWRSVCDMEPSCQYGFFDCKRVENSLRVSWFIASNITILCSPKANFYQFGIYGDAVTSQVTISSFFHKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPSELRQSVRKYNQYKWLATRGVDEEALLKGLPADLRRDIKRHLCLELVRRVPLFDQMDERMLDAICERLKPALCTENTYLVREGDPVNETLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALGPRPSFILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEAAELRALSYVQSKREGESVGLVAYGTRMTRKGTVHSDEVVNSLQKPEEPDFSVGE* | 686 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu11g0831 | 685 | Gene3D | Jelly Rolls | 473 | 593 | IPR014710 | - | |
Pvu11g0831 | 685 | PANTHER | - | 37 | 684 | - | - | |
Pvu11g0831 | 685 | Pfam | Ion transport protein | 84 | 402 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Pvu11g0831 | 685 | SUPERFAMILY | Voltage-gated potassium channels | 75 | 397 | - | - | |
Pvu11g0831 | 685 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 37 | 684 | - | - | |
Pvu11g0831 | 685 | CDD | CAP_ED | 475 | 606 | IPR000595 | - | |
Pvu11g0831 | 685 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 475 | 572 | IPR000595 | - | |
Pvu11g0831 | 685 | MobiDBLite | consensus disorder prediction | 666 | 685 | - | - | |
Pvu11g0831 | 685 | Gene3D | - | 87 | 399 | - | - | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 139 | 148 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 256 | 266 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 344 | 361 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 370 | 381 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 388 | 397 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | PRINTS | EAG/ELK/ERG potassium channel family signature | 438 | 445 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Pvu11g0831 | 685 | SUPERFAMILY | cAMP-binding domain-like | 405 | 601 | IPR018490 | - | |
Pvu11g0831 | 685 | Gene3D | Helix hairpin bin | 402 | 466 | - | - | |
Pvu11g0831 | 685 | SMART | cnmp_10 | 475 | 606 | IPR000595 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu11g0831 | Pvu-Chr11 | 7573119 | 7577631 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu11g0831 | 50 | 682 | Ion Channels | AT2G28260 | 77.129 | 0.0 | 1011 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu11g0831 | K05391 | - | gmx:100791992 | 1230.31 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu5g1384 | 5 | 36073693 | 36077390 | Pvu11g0831 | 11 | 7573119 | 7577631 | PCT |