Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0798 ATGGCGTCCTCCAACACTCCCAAATCTCCCAAAGCCAAGAAAGGAGAAATCTCCACAACCCAATGTAAAACGAAGAAGAAGAATCGAGACATCGCGAAAGAGGAGAACCAAAAGAAGAAGAATAAGAGGCCCAAGCTCAGCAACGGCAATTCAAAGCAGCCACAGGAAAAGGGCGCAGAAGGAAGTGGTGAAGATGTGAAAACCAACGTGTTTCCAATGAATCGTATCAGGACCTTGATCAAGGGCGAAGGTCCTGACATGCGTGTTTCGCAGGAAGCCGTGTTAACCATCAACAAAGCTGTGGAGAAGTTCCTTGAGCAATTTACGCAGGATTCATATGCTTGTTGTGTTCAGGACCGCAAGAAATGCCTGAGTTACAAGCACGTGGCAAATGTTGTTAGTAAGAAGATGAGATACGACTTTCTTTCCGATTTTGTTCCTGAGAAAGTGAAAGCTGAGGATGCATTAAGAGAGAGAAATGCAGCAGGCAATGGAGTATTTCAGAAGATCTAA 513 0.4483 MASSNTPKSPKAKKGEISTTQCKTKKKNRDIAKEENQKKKNKRPKLSNGNSKQPQEKGAEGSGEDVKTNVFPMNRIRTLIKGEGPDMRVSQEAVLTINKAVEKFLEQFTQDSYACCVQDRKKCLSYKHVANVVSKKMRYDFLSDFVPEKVKAEDALRERNAAGNGVFQKI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0798 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 12 163 - -
Pvu11g0798 170 Coils Coil 22 42 - -
Pvu11g0798 170 MobiDBLite consensus disorder prediction 1 70 - -
Pvu11g0798 170 SUPERFAMILY Histone-fold 49 142 IPR009072 GO:0046982
Pvu11g0798 170 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g0798 170 MobiDBLite consensus disorder prediction 18 42 - -
Pvu11g0798 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 12 163 - -
Pvu11g0798 170 Gene3D Histone, subunit A 17 148 IPR009072 GO:0046982
Pvu11g0798 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 71 133 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0798 60 129 CCAAT-HAP5 Transcription Factor Family AT1G07980 41.429 6.07e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pvu11g0798 CBFD_NFYB_HMF 6.1e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0798 - K03506 gmx:100793738 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0798 11 7154641 7160660 Pvu11g0798 11 7154641 7160660 ECH