Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0769 ATGGGTAGACCTAAAGATGAGGAGTACTGGAATCAAGTTTCTGTTGAAGAAGATGGTAGGTTGAAGTGCAAACACTGTGGACTGAAATTCAGAGGAGGAGTTTCAAGAATTAAAGCACATGTTGATCGAATACAAGGAAAAGGCATTCGTATATGCTCCTCTCTTCCTAACCATATCTCAGCTTCAAATCATTCCCAACAACATATAAATGTCATCACCACATCACAAGTGGCCGAAAGGGTTGGGGAAATGACTGATATTGTTGGTGGTTCAATTAACCATGAAACAGGATCAACATTATTAGGAGTGGTTGAAGGTGATCTAGGTGATATAGAAATGGTTGATAATGCACTTAACCCTGAAAGGTGTGCATCATTACAAGATTATGAAGCTCATAATGGTACTTTGAGGACTACTTTGCAAAGTAAGTTAGATGTGATTATATCCAATCTGAGAAGTAAAGAAGACGACATTCAGACACAATTACAGTTGTTGGAGTCACGTGGCAAGAAGCGCAAGAGAGAGGTTGATCATTGGTTGTGCGGACTGCAGGACATGAAACAACGAGCTGTTGATATAAAGAACTCACTGAATCAGTTTGAGTGTTTCTCTGTTGTAGAAGAAGAAATATATTTGCCTGAAATATCAGAAGAATTTAACAAAATACAATGGTTAACTAAAAAAGTGGAAGAGCATGAGGTAAAGAAGCCTTCGGTTTTGTCAAATGAATTTGTTGGTAGCAAATTTGGGAAAAATGTTAGGAAGATTCAGAAGCTTCTGGAAGATGATAGAGTTTTGATGATTGGCATATGTGGAACTGGGGGAGTGGGAAAAACATTCCTAGCAACTTACATGCATAGTGAGATAAAAAGAAACAAAACTTTCAAGGATGTCTTATGGGTCACTGTTTCCCATAATTTCACCATTTTCAAATTGCAACAGCACATTGCAGAAATAATAAAGGTAAGACTTTCGGGAGATGATGAGAGAAGAAGAGCAATGATTTTGGCATCAGAGTTAGAAAAAAGAGAAAAGATAGTAGTTATTTTGGATGATGTTTGGAAATATATTGATCTAGAAAAGGTGGGAATTCCTCTTGGAATAAAGGGTATTAAATTGATCATCACAAGTCGTTTGAAAAATGTGTTTGAACAGATGGATTGTGAGTCAATTAATATGATAACTGTGAGCCCTTTCCGTGATTTTGACGAAGCTTGGGAGTTGTTTTTACTAAAACACGGACACCTTGGGACACCTTCAACACTTCATCCTGAAGTGGAAAATATTGCAAGATCTGTTGTAAGGGAATGTGATGGTTTACCACTTGGAATCAGTGTGATTGCTCGAATCATGAAAGGAAAATTTGACTTGTATTGGTGGAGACATGCGCTGAATAGATTTGACACATTGGAAATGGAAGTGGAGATGCAGGAAGAAGTTTTAAGTGTACTAAGACGCAGCTATGATAATTTAAATGAAAAGGACGTGCAAAAATGTTTCTTGTATTGTGCATTGTTAGCTAATGATTTCGAAATTGATAATTTGATTATGAAGCTTGCTGACAGGGGATTGTTGAATGGAAAGAGTAGTTTGAAGGAAATATTTGATGAGGGGTATGTCATGGTGAATAAACTCATAAACCATTCTTTATTGTCGGGTAGTTTTGTTTTCGCGAGGAGAGTAAAAATGAATGGTCTGGTGAGGAAAATGGCGTGGAATATCTTGAAGGAGAGTGGCATTAACATGATGGTAAAATGTAATAAAGCTATGGAAAAGATAACTCACATACGGGAATGGACAATTGATTTGGAAGCAGTTTCTCTGCCTAAAAACATGATACAAGAAATTCCAGAGGGCACTTCTCCTAATTGTCCACGCTTGTCCACCTTGTTTTTATTTGAAAATTTGATTAAACGTATTCCAGAGTGTTTTTTCACACACATGAATGCTCTAACAACACTTGATTTATCACAAAATGAAGAGTTAACATGTTTGCCTCATTCGCTGTCTAACTTGAGGTCTCTCACTTCTTTAACCCTCAAAGAATGTTCAAAATTGGAATATATACCTCCATTGGGGGAGCTACAGTCATTATTAAGATTGCAGATTTCATATTGTTTCATCCAAGCAGCACCTGAAGGTTTGGAAAATCTAATGAAGTTGGAATTGCTAGATCTGTCGATGAATGACAATTTGAAGTTGGTACCAGGAAGTTTTCTCCCTAGTTTGACCAATATTCAATACCTGAATGTCTGGGGTAGTTCAAGTATAAGTGTAGAGGATGTAAAGGGGATGACTATGCTTGAATGTTTTTCAGGAAGGTTTGTGGATGGGGATAACCTCAACCGTTATGTGCGAGAAACCCTGGACAGCGGTTATGGACCTCAAACTTATCTTATCCATTATCAGGATTGGAATGACAAAAAGTATTTTACCTTCGAAGAAACTCCTATTGAATTTGAGTGCCGAACTATAAACATTGGAGATTGCAAAGAATTCTCATATGCCCTCCCGAGAGACCTAGCAATATTATCTGTAGAAGACAATGATCAATGGGAATGCTTTTGTGCTCCTCTGTCGTCAAATTGTCCTAAGCATTTGACGGAAATTTCTGTTACTAGATGCACTAACCTAGAGAGCTTATTCTGTTTGTCTTGTTCCTTATGCGCTAATATCGAAAGCCTTCAATATTTGAGTCTTTGTAATTTGGAAAGTTTAACTGCTATCTGCAAGGAAGATATTGCGAATTTAATACCACCTCCGTCCCCCAGAGGCATCTTTTCTAATCTCAAACACTTTGATATCTACCATTGTCGTGGAATAAAGACGTTGCTGACACCAAGCTTAGTGCCACAACTTCAAAACCTGGAGTGTCTATCTGTATCAGACTGCCATTCAATGGAACAGATATTTGCAGAGTTATGA 2925 0.3754 MGRPKDEEYWNQVSVEEDGRLKCKHCGLKFRGGVSRIKAHVDRIQGKGIRICSSLPNHISASNHSQQHINVITTSQVAERVGEMTDIVGGSINHETGSTLLGVVEGDLGDIEMVDNALNPERCASLQDYEAHNGTLRTTLQSKLDVIISNLRSKEDDIQTQLQLLESRGKKRKREVDHWLCGLQDMKQRAVDIKNSLNQFECFSVVEEEIYLPEISEEFNKIQWLTKKVEEHEVKKPSVLSNEFVGSKFGKNVRKIQKLLEDDRVLMIGICGTGGVGKTFLATYMHSEIKRNKTFKDVLWVTVSHNFTIFKLQQHIAEIIKVRLSGDDERRRAMILASELEKREKIVVILDDVWKYIDLEKVGIPLGIKGIKLIITSRLKNVFEQMDCESINMITVSPFRDFDEAWELFLLKHGHLGTPSTLHPEVENIARSVVRECDGLPLGISVIARIMKGKFDLYWWRHALNRFDTLEMEVEMQEEVLSVLRRSYDNLNEKDVQKCFLYCALLANDFEIDNLIMKLADRGLLNGKSSLKEIFDEGYVMVNKLINHSLLSGSFVFARRVKMNGLVRKMAWNILKESGINMMVKCNKAMEKITHIREWTIDLEAVSLPKNMIQEIPEGTSPNCPRLSTLFLFENLIKRIPECFFTHMNALTTLDLSQNEELTCLPHSLSNLRSLTSLTLKECSKLEYIPPLGELQSLLRLQISYCFIQAAPEGLENLMKLELLDLSMNDNLKLVPGSFLPSLTNIQYLNVWGSSSISVEDVKGMTMLECFSGRFVDGDNLNRYVRETLDSGYGPQTYLIHYQDWNDKKYFTFEETPIEFECRTINIGDCKEFSYALPRDLAILSVEDNDQWECFCAPLSSNCPKHLTEISVTRCTNLESLFCLSCSLCANIESLQYLSLCNLESLTAICKEDIANLIPPPSPRGIFSNLKHFDIYHCRGIKTLLTPSLVPQLQNLECLSVSDCHSMEQIFAEL* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0769 974 Pfam NB-ARC domain 254 490 IPR002182 GO:0043531
Pvu11g0769 974 Gene3D - 401 492 IPR042197 -
Pvu11g0769 974 SUPERFAMILY L domain-like 568 964 - -
Pvu11g0769 974 Gene3D - 230 396 IPR027417 -
Pvu11g0769 974 Pfam Leucine rich repeat 625 681 IPR001611 GO:0005515
Pvu11g0769 974 PANTHER DISEASE RESISTANCE PROTEIN RP 175 960 IPR044974 GO:0006952
Pvu11g0769 974 Gene3D Ribonuclease Inhibitor 821 974 IPR032675 -
Pvu11g0769 974 Coils Coil 148 168 - -
Pvu11g0769 974 Coils Coil 474 494 - -
Pvu11g0769 974 Gene3D Ribonuclease Inhibitor 565 783 IPR032675 -
Pvu11g0769 974 PRINTS Disease resistance protein signature 267 282 - -
Pvu11g0769 974 PRINTS Disease resistance protein signature 340 354 - -
Pvu11g0769 974 PRINTS Disease resistance protein signature 437 451 - -
Pvu11g0769 974 PRINTS Disease resistance protein signature 716 732 - -
Pvu11g0769 974 PANTHER - 175 960 - -
Pvu11g0769 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 250 503 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0769 Pvu-Chr11 6812493 6817167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0769 265 757 WRKY Transcription Factor Family AT4G12020 22.862 3.92e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0769 - - pvu:PHAVU_008G020700g 1235.32