Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0752 ATGGGGAAGAAGAAGCAGAAAGTCGTTCTTCCGCCGGAGCTTCCGCCAGAGATTCCAGACGACGAAGTTGAGGTTTCCGACGATGACCTCCAATTCATCAAAGAGAATCGCAACTATGCCTCCCTGCTCTCCACCTTAGACTCTTTCTTCCAATCCTCTGTAACTCTGGTTGGCCCGGAATATTTGGGCCTGCTGGTACCCGATACTGGGTTGTCCTGGCATGTTACTCGGGTTGCTGATGCCAAAGAGGATGCATTGGAGAAACTTTATGAGAAACGCATGCAAAAAAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGAATGAAAAATCCATTACCGGACAGTGCTTGGGTTCTCACAATTCTGCAGCTACAAAGACCGTATCAGAAAATGATCTAAGTGAAGAGGGAACTGCAGAGGATGCCAATGCGGATGAAGTCAAACTTAAGAAAATAAAAAAAGAGGCCAAAAAACAAGGGAGAGAAGTGGCTAAAGCAGAAGTGGAAGAGACACCACAAGCAGCAGTGCTGGCTGAGGTAAAGGAAGATCTTACAGCTGAGGAGGCATTTGAAAGCAAGAAGTCTAAACTTGCAGAATTGGGGGATGCCTTGCTTACAGATCCAGAGTCCAACGTTAAATTTCTGAAAGAGATGGTGCAATTATCTAAAGATAACGATCATACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGTTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAGATGCGATAAGGTTCTATTGAAACTTTGTTGGTCCGCAGTTAAATCACTCTTTACAAATGAGGGTAAATATGGGGGTGAAGTTACTGTTGAGGCTGTTCGATTGATTGCCGATTATGTTAAAGCTTACAATTGCCAATTGCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATGAAGATCTCTTGAAATCTGGAAAGACAGAAGAGGATCAGAAATTAAAAGATAAGAAAAGGAAACACTTCAAGGCATCAAATCAGTTGGTGGAGAATGATAGAAAGAAAAGTAGGCAAGAATTGATTTCTAAGACGAGAGAGGAGGTTGAAGTTGATTACAAGGCTGCATCCTTTGCCCAGGATGTTATTGAGAGGAAACAGATGCAAACTGAAACACTCTCATCTGTGCTAGGTGTGGTTTATATTGCGTGTATTACTAGTTCAAGGGAAAATATTGCTAACGCTGAGGCATTATCTGCTGCAGTGGAACCCCTCCCTTTGCTTGCTCCTTGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGATGATCTAATGAACCATCTGAAAGTACTTGCTTCTGGAAGTAGCAACTCAGGCAACACTTCTGTCAAGTGTTCTAAATGTTTGACTGTATCAGAACGTCTTCAATGCTGTATCGTTGCTTTTAGAGTGATGAGGAACAATCTTCATGCCTTGAATGTTGATTTACAGGACTTCTTTATGCATCTTTACAATCTTGTACTTGAATACAGGCCAGGAAGTTTATGCTCATTAGTAATTATATCTTTAAACATCACATTGACAAGATGTATGCCCAAATTACAGTATATTACCTTGGTCACAGTAAAGCATCTCCTTCAGAAGAATGTCAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGAGGCTCTGTTTCTGGCACAATTCCGAAATATCTACCATATTCCACAGACCCCATATTAAGTGGTGCCCTTACCTCAGTACTTTGGGAACTCAATCTTTTGTCCAGCCATTATCATCCAGCTATATCGACTCTGGCCTCAGGCATTTCAACCATGAGTACTGCACATAACCAGGTTCTTTTATCCAAGTCCTCTCCTCAACTAGCTTTTAAGGAAATGTCTCTGGACCAGGAATTATGTTTCACACAACAAAGTGGCAGTATAAAATTAAATAACAAGCGGAGACGAACAAATGGCCCTGCTACGTCACGTTCCATTGGTTCTACAACTGTAATGAGTTCATTTGATGACAATGAGTTGCAGAGGAAACTTATTTCCCATTTTATGGTTCATCATGACATCAAGGAGAATGAAAGGTTGAGAAAGGAGCTGGACAGGACTGCACTATCGCTACAGCTATATGAACAATATTAG 2241 0.4101 MGKKKQKVVLPPELPPEIPDDEVEVSDDDLQFIKENRNYASLLSTLDSFFQSSVTLVGPEYLGLLVPDTGLSWHVTRVADAKEDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLNEKSITGQCLGSHNSAATKTVSENDLSEEGTAEDANADEVKLKKIKKEAKKQGREVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKSKLAELGDALLTDPESNVKFLKEMVQLSKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRRCDKVLLKLCWSAVKSLFTNEGKYGGEVTVEAVRLIADYVKAYNCQLHPDSVDVFLSLSFNEDLLKSGKTEEDQKLKDKKRKHFKASNQLVENDRKKSRQELISKTREEVEVDYKAASFAQDVIERKQMQTETLSSVLGVVYIACITSSRENIANAEALSAAVEPLPLLAPCLKGLAKFSHLIDLDFMDDLMNHLKVLASGSSNSGNTSVKCSKCLTVSERLQCCIVAFRVMRNNLHALNVDLQDFFMHLYNLVLEYRPGSLCSLVIISLNITLTRCMPKLQYITLVTVKHLLQKNVKCRNLLENDIGGGSVSGTIPKYLPYSTDPILSGALTSVLWELNLLSSHYHPAISTLASGISTMSTAHNQVLLSKSSPQLAFKEMSLDQELCFTQQSGSIKLNNKRRRTNGPATSRSIGSTTVMSSFDDNELQRKLISHFMVHHDIKENERLRKELDRTALSLQLYEQY* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0752 746 Pfam CBF/Mak21 family 555 635 IPR005612 -
Pvu11g0752 746 MobiDBLite consensus disorder prediction 1 22 - -
Pvu11g0752 746 Coils Coil 82 106 - -
Pvu11g0752 746 Coils Coil 153 183 - -
Pvu11g0752 746 Pfam Nucleolar complex-associated protein 207 284 IPR011501 -
Pvu11g0752 746 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 284 IPR016903 -
Pvu11g0752 746 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 286 704 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0752 Pvu-Chr11 6619931 6627155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0752 1 733 Core DNA Replication Machinery Family AT1G79150 37.906 1.53e-141 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0752 K14834 - gmx:100794797 720.309