Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0735 ATGAATCGGTTCATAGAAAACTTGCCGCCAATGGATCTGATGCGCTCGGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGCAGAGTCCTCGCACCGCGCCATCACCTATTTAGGCGAACTCGGCCTTATCCAATTCCGAGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAACTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCTTCTCCTTCAGTCTTGCAATCAGATATTCATCTGGAGGATTTAGAGATACAACTTGCTGAGCATGAATATGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGAAATCATATAATGAGCTCCTGGAGTTCAAGATTGTATTAGAAAAGGCATGTAGTTTTCTTGTTTCAAGCCGTGGTGCTGTTGTTCCAGAAGAGCGAGAACTGGAGGAGAATGTTTTCTCACATGGAAACTATGTTGAGACACCATTTTTGTTTGAACAGGAAATTACGCCTGCTCCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGATTTGAAAGGATGTTGTTTCGAGCTACAAGAGGGAATATGCTTTTCAATCAGGCACCAGCTGATGAACACATCATTGATCCTATTTCAACTGAGATGGTTGAGAAAACTGTCTTTGTTGTGTTCTTCTCTGGGGAGCAAGCAAGAATAAAGATCCTGAAAATTTGTGATGCATTTGGTGCAAACTGTTACCCTGTCCCTGAAGATATAAGTAAGCAGAGGCAAATAACATCAGAGGTTTCAGCACGTCTTGCTGACTTAGAGGCAACTCTGGAAGCTGGAATTAGGCATCGGAACAAGGCTCTAGCTTCTGTAGGAGGCCCTTTAACAATATGGATGGACATGGTAAAAAGAGAGAAGTCTGTGTATGATACACTGAATATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCAGTATTTGCAAAAACACAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTGAGGTTGGCATAATATTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAGGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCAGCAGTTTATACAACTATTATATTCCCTTTTCTTTTCGCGGTGATGTTTGGCGATTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAGAACAAGCTTAGCACCCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCTATTTATTGTGGGTTAATATACAATGAATTCTTCTCTGTTCCTTATCACATATTTGGTGCCTCTGCTTACAAATGCCGGGATAATACATGCAGGGATGCACATACTACTGGCTTAGTAAAATATCGAGAACCATATCCATTTGGTGTGGATCCCAGCTGGCGGGGAAGTCGTTCAGAACTGCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCACATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCATTTCTTTGGCAGCTTACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAATTGTTTATTTGGGTATCTTTCCCTTCTCATCATTGTTAAGTGGTGCACTGGCTCTCAGGCAGATCTTTATCATGTAATGATATACATGTTTTTAAGCCCTTTTGAGAATCTTGGTGATAATCAATTGTTTTGGGGCCAAAGGCCACTTCAAGTTCTGTTGTTGCTTTTGTCTGTAATTGCAGTGCCGTGGATGCTCTTTCCGAAACCCTTTATGCTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTACGGTGTGCTACATACCTCTGAGGTTGATCTAGAGTTGGAACCAGGTTCTGCCAGGCAACATGACGATGACTTCAATTTCACAGAGGTCTTCGTTCACCAAATGATTCATTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGTTACTTGCTTGGGGGTATGACAATCTTGTCGTTCGGTTAGTGGGGCTAGCTGTCTTTTCCTTTGCAACTGCCTTTATACTATTAATGATGGAGAGTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTGGAATTTCAGAATAAATTTTACCATGGTGATGGATGCAAGTTCAGGCCTTTTTCCTTTGCTTCCTTAACAGAGGATGAAAATTGA 2457 0.4103 MNRFIENLPPMDLMRSEKMTFVQLIIPAESSHRAITYLGELGLIQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSPSVLQSDIHLEDLEIQLAEHEYELIEMNSNSEKLRKSYNELLEFKIVLEKACSFLVSSRGAVVPEERELEENVFSHGNYVETPFLFEQEITPAPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEHIIDPISTEMVEKTVFVVFFSGEQARIKILKICDAFGANCYPVPEDISKQRQITSEVSARLADLEATLEAGIRHRNKALASVGGPLTIWMDMVKREKSVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSNSEVGIIFHSMDALESPPTYFRTNSFTGPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARENKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNTCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNAHFFGSLLDIRYQFVPQMIFLNCLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPFENLGDNQLFWGQRPLQVLLLLLSVIAVPWMLFPKPFMLKKLHNERFQGRTYGVLHTSEVDLELEPGSARQHDDDFNFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVVRLVGLAVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGCKFRPFSFASLTEDEN* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0735 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Pvu11g0735 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu11g0735 818 PANTHER VACUOLAR PROTON ATPASES 5 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu11g0735 818 PANTHER VACUOLAR PROTON ATPASE A1 5 817 - -
Pvu11g0735 818 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0735 Pvu-Chr11 6398436 6409366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0735 1 811 Primary Pumps ATPases(2) AT2G28520 77.914 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0735 K02154 - gmx:100800799 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1423 5 36629304 36640152 Pvu11g0735 11 6398436 6409366 PCT