Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0726 ATGGATGGTGTTTTGTTGGGTAGTCCACACTATTCACAAACGGGAAGGGAAAGAAGAAGAAGAAGAAAGCAGATTGGGACATTTGAAATTCAATTTGAAAAGTCCCAACGCCAAAAGGCAAAAGCCATTGAAGACACTGTGCAAAGTGGACCTAATAATAATAATCACATTCTGAATCCTGAATCCCAATTCTCACCCACTTTCCTTGCTTGCTTCAGTGTGTGTGCAGAGAAACGAAAGGAAATGGAGAACAACGCGGAATCTGAGAAACCGAAAGGGAAAGGGATTCCAATTCACGGAGGCAAGTACGTGCGCTACAACATCTTAGGCAACTTTTTCGAAGTCTATGCTAAGTACGCACCTCCTCTCCAACCCGTTGGTAGAGGCGCATACGGCATCGTTTGCTGCGCCACGAATTCGGAGACCGAAGAAGGAGTTGCGATTAAGAAGATTGGGAATGCGTTTGACAACAGGATCGACGCAAAGAGGACGCTCAGGGAAATCAAGCTTCTCTGCCACATGGAACATGATAACATAATTAAAATTAAGGACATAATTCGGCCAGCGGAGAGGGAGAATTTCAATGATGTGTATATTGTGTATGAGTTGATGGACACCGATTTGCATCAGATTATACAGTCTAATCAGGCTCTCACTGATGAGCACTGTCAGTACTTTCTATATCAACTCTTGCGAGGATTGAAGTACATACACTCTGCAAATGTTTTGCACCGAGATCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACCTCAGAGACCGACTTTATGACAGAATATGTTGTCACTCGTTGGTACAGGGCCCCTGAATTGTTATTGAATTGTTCAGAATATACTGCTGCTATTGATATTTGGTCGGTTGGTTGTATTTTAATGGAGATAATTAGAAGGGAGCCTTTATTTCCTGGTAAAGATTATGTCCAGCAGTTGGCCCTTATAACTGAGTTACTAGGTTCACCAAATGATTCGGATCTTGGGTTCCTCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTTCAACATATAGAGAAGCAGTCTTTTGCTGAGCGGTTTCCTGATACGTCCCCGTTAGCAATTGATCTTGCTGAGAAAATGTTGGTCTTTGACCCCTCCAAGCGAATAACTGTCGAAGAAGCCCTGAATCACCCATATATGGCAAGTCTTCATGAGATAAACGAGGAGCCCGTTTGCCCAACTCCTTTCATCTTTGATTTCGAACAGGCAACTCTCAACGAAGAAGATATAAAAGAGCTCATATGGAGAGAGTCTCTAAACTTCAGCCAGGAACAGATGTTGGAATAG 1365 0.4242 MDGVLLGSPHYSQTGRERRRRRKQIGTFEIQFEKSQRQKAKAIEDTVQSGPNNNNHILNPESQFSPTFLACFSVCAEKRKEMENNAESEKPKGKGIPIHGGKYVRYNILGNFFEVYAKYAPPLQPVGRGAYGIVCCATNSETEEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHDNIIKIKDIIRPAERENFNDVYIVYELMDTDLHQIIQSNQALTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLQHIEKQSFAERFPDTSPLAIDLAEKMLVFDPSKRITVEEALNHPYMASLHEINEEPVCPTPFIFDFEQATLNEEDIKELIWRESLNFSQEQMLE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0726 454 CDD STKc_TEY_MAPK 113 448 - -
Pvu11g0726 454 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 451 - -
Pvu11g0726 454 SUPERFAMILY Protein kinase-like (PK-like) 123 412 IPR011009 -
Pvu11g0726 454 ProSitePatterns MAP kinase signature. 155 258 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu11g0726 454 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 97 451 - -
Pvu11g0726 454 Pfam Protein kinase domain 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0726 454 ProSitePatterns Protein kinases ATP-binding region signature. 126 150 IPR017441 GO:0005524
Pvu11g0726 454 Gene3D Phosphorylase Kinase; domain 1 103 443 - -
Pvu11g0726 454 SMART serkin_6 120 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0726 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Pvu11g0726 454 ProSiteProfiles Protein kinase domain profile. 120 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0726 454 Gene3D Transferase(Phosphotransferase) domain 1 204 433 - -
Pvu11g0726 454 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0726 Pvu-Chr11 6239531 6243990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0726 89 447 MAP Kinase Gene Family AT1G07880 79.387 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu11g0726 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0726 K04371 - gmx:100802929 723.391