Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0725 ATGAACAATAATGTTGGGAAAGGGAAAAGAGGTTTGGCAGAACACAATCATATGATTTTTGACAAAAAGAGTCTCAATTGTGGAGTAGCCAATGGAGGGGTTTCACAGCAACCACCTCAAGGGCCAGTCATATGCTGGGAGAGATTTCTTCCTGTGAGATCGATAAAAGTTTTGTTGGTGGAAGATGATGATTCAACATGCCATGTGGTGCGTGCTCTGTTACGCAATTGTAATTACGAAGTTACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAGTCCTAGAAGATCCAGAAAATTGCATTGGTCTTGTCTTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTTTTGTGCAAGATTATGAACCACAAAACTCTGAAGAATATCCCTGTGATTATGATGTCGTCTCACGATTCTATGGGTATTGTCTTTAAGTGTTTGTCAAAAGGCGCTGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAGAATCTTTGGCAGCATGTTTGGAGAAGATGCCACAGTTCTAGTGGTAGTGGGAGTGAAAGTGCGACCTACACCAGAAAATCTGCAAAGTCAAGAAGTAATGATGCTTCTGAAAACAATGGTGACAGCAATGATGAGAATGACTATGGAAGCAAAGGCTTGAGCATTCGAGATGGAAGTGATAATGGAAGTGGCACTCAGTGCAGAATTGCTAACATTGTTAGGTGGGTGGCTAATGTATTAATTCCTCCCATTAAAAAAATATTTATAGGGTTGTCACTTAAATTGGGAGTCTCACTTTAA 801 0.3995 MNNNVGKGKRGLAEHNHMIFDKKSLNCGVANGGVSQQPPQGPVICWERFLPVRSIKVLLVEDDDSTCHVVRALLRNCNYEVTAVSNGLQAWKVLEDPENCIGLVLTEVAMPILSGIGLLCKIMNHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSSSGSGSESATYTRKSAKSRSNDASENNGDSNDENDYGSKGLSIRDGSDNGSGTQCRIANIVRWVANVLIPPIKKIFIGLSLKLGVSL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0725 266 ProSiteProfiles Response regulatory domain profile. 56 174 IPR001789 GO:0000160
Pvu11g0725 266 MobiDBLite consensus disorder prediction 178 216 - -
Pvu11g0725 266 Gene3D - 54 214 - -
Pvu11g0725 266 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 228 IPR045279 GO:0009736
Pvu11g0725 266 Pfam Response regulator receiver domain 57 168 IPR001789 GO:0000160
Pvu11g0725 266 SUPERFAMILY CheY-like 53 180 IPR011006 -
Pvu11g0725 266 MobiDBLite consensus disorder prediction 178 229 - -
Pvu11g0725 266 SMART REC_2 55 170 IPR001789 GO:0000160
Pvu11g0725 266 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 33 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0725 Pvu-Chr11 6218052 6226719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0725 11 233 Response Regulator Gene Family AT5G60100 64.317 4.65e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu11g0725 Response_reg 1.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0725 K12129 - pvu:PHAVU_011G070700g 518.85