Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0724 ATGCAGAGTTCGTGGACTAAATGTCTGGCTCAAGTTGGCAGTCCACGTCCAGTTTCACCTCATAAACAATTGGCTGATGCCCCAGATAGCACTTGTGCCCAAGTGATGCAAACAAAGACTGAAAAAGTTAGTAGTAGATGGGTGCATGCAACAGAAAAAGAGTGCCTTGAACTCATTGATCATCTTGATGATGTTGCAATGGGCAAGGACTTGGCTGTGGGAATATCTTTGAATATGCAACTAGATCATCGACTTGAGGAACTTTCTAGCCATCGAATGGGTAAAGGGGCAAATAAAATGTCTGATGTTGAAAATATGCAGATAGTTAAAGAACAGAGTAATGCCTGTGAAAATGGACAACTGGAGTACAATGGTGGTAAAACCAGGACACAGGAAAATCAAACTATGAATGTTATCGATTTTACTGATAGCAATAGTCCACAGGCTGAAAGCAGAGACTTGAATACTCCAAATGGGTTTTCTGGTTTCTCACTAACAAAAGAAAACTGTTGCCCTAAAGACCATCCATCCCTGGAACTAACTTTGAAAAGGCTTGGAGAAGTAAGAGATTCTAAAAATGTCACGGGTGAAGAATGCAATGTGTTGAGACATTCAGACCAGTCAGCATTCTCAAAATATAATACTGCTTCTTCTGCTAACCAGGCTCAAACCGGAAATGTAGGAAGCTGTTCGCCACTAGCCAATGGCTCAGCTGCACCGAATGCAGAGGTAATACACAACTTTCCATCTCACTCAAATGTCACTCCTCCAAACCAACAATCTAATGGAAGCAACAACATCAATGACATGGCCTCCACTAATACATATCTTGGGACCAAACCTTGTACTTTTGACAAGATGCCAGAGTCTGTAAGAGGGATGGGCTCATTTAATTCCTCTGAACTCCAAACTTTACCGAACAATGGTATCTCATCATCTCAGAAGAAAACTTTTGCCCGGGAAGAATATATGGAAATTGTTAGAGGACAAATGGGAGGCTCTGAACATGAATTCCAAGTCGAGCACACTCATTATGAGCTTCACCATTATAATCACATTTCCCATAAAGCTACTGTAGATCTCCAATCAGATCATGATCTCTTACTCAAAAACTCGCCCAACACTGCTCAGCAATGTGTATCATCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTACACAGTAGATGGAAATGCTGTGGAGAGTGATCATGGGAGCAATGGACAGGACGGAACCTTGACACTGAGGACAGTAAATGTGGAAAATGGCAATGTGGCTGTTGGGAGCATTGGAGTTGGTGGCATTGATAGGAAAAACATTGGAAATGTGGCAGATGAAGGACGACTTGCATTGAGAGAAGCTGCTTTGACCAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAAAGGGTTCGATATCATAGCAGGAAAAAACTAGCAGAACAGCGGCCTCGTATTAGGGGACAATTTGTTAGACGAATAGTGTCTGAACCCAAAGAAGATAAAGATCACCAAAGTGACAACCGGGTACCTGGGGATAATAGCGACATCCCTCAATAA 1572 0.4198 MQSSWTKCLAQVGSPRPVSPHKQLADAPDSTCAQVMQTKTEKVSSRWVHATEKECLELIDHLDDVAMGKDLAVGISLNMQLDHRLEELSSHRMGKGANKMSDVENMQIVKEQSNACENGQLEYNGGKTRTQENQTMNVIDFTDSNSPQAESRDLNTPNGFSGFSLTKENCCPKDHPSLELTLKRLGEVRDSKNVTGEECNVLRHSDQSAFSKYNTASSANQAQTGNVGSCSPLANGSAAPNAEVIHNFPSHSNVTPPNQQSNGSNNINDMASTNTYLGTKPCTFDKMPESVRGMGSFNSSELQTLPNNGISSSQKKTFAREEYMEIVRGQMGGSEHEFQVEHTHYELHHYNHISHKATVDLQSDHDLLLKNSPNTAQQCVSSNAFGGPAESNAANYTVDGNAVESDHGSNGQDGTLTLRTVNVENGNVAVGSIGVGGIDRKNIGNVADEGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSEPKEDKDHQSDNRVPGDNSDIPQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0724 523 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 2 490 - -
Pvu11g0724 523 MobiDBLite consensus disorder prediction 486 514 - -
Pvu11g0724 523 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 490 IPR045279 GO:0009736
Pvu11g0724 523 MobiDBLite consensus disorder prediction 1 26 - -
Pvu11g0724 523 Pfam CCT motif 455 496 IPR010402 GO:0005515
Pvu11g0724 523 MobiDBLite consensus disorder prediction 482 523 - -
Pvu11g0724 523 ProSiteProfiles CCT domain profile. 455 497 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0724 Pvu-Chr11 6194542 6198381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0724 2 500 Response Regulator Gene Family AT5G02810 33.712 1.36e-42 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu11g0724 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0724 K12129 - gmx:100785796 698.353