Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0723 ATGGGTTGCTTTTGTTGCGCAGGGAAATCATGCACCAATTCGGATACCGAAGACTATGGTAACAACTTCGACCACAAACCCTCCAATTTCACACCCGCAGAAAGCGTCAAAGTTGATTTCAAAGTGAATGGGAAAAAAGAAGATGGTTCTAAAGGTGATCAGCTTGCTCTGGACGTGAAGGATTTAAATTTGAAAGAGGAGGGTCCTCATGATGGAAAAGATAATGGCAATCGGGCGCAGTCATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAATTTTACGGCAGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGGATACGAGAATTCGCAGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATCTTGTCAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAATTCATGCCATTGGGGTCTTTGGAGAATCACTTGCTTGATCTTCGGCCTGGTAGCAAACCACTAGATTGGAACACAAGAATGAAAATAGCAGCTGGGGCAGCAAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTCATATATCGTGACTTGAAATGCTCTAACATTTTGTTAGGAGAGGGATTTCATCCTAAGTTGTCAGATTTTGGCCTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGTCAATTGACATTTAAGTCAGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATTACTGGCCGGAAGGCTATTGACCATATGAAACCTGCCAAAGAACAAAATCTAGTTGCGTGGGCAAGACCCTTGTTCAGAGATAGGAAAAAATTTCCCTTGATGGTTGACCCTTTACTTCAAGGTCGATATCCCGTGAGAGGCTTATACCAAGCTCTTGCCATTGCTGCAATGTGTGTGCAAGAGCAACCTAATATGCGGCCTGTTATAGTTGATGTTGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCTCAACTTCACCCAGCACAAAGCTCTAGAAGAAGTCCACCTTCTCAGGTAATGCAAAGGGATGATGATGAAGAACGTAGACTTATTTTAAGCACGGAGCATGTGACAGACAGATCTTAA 1251 0.4309 MGCFCCAGKSCTNSDTEDYGNNFDHKPSNFTPAESVKVDFKVNGKKEDGSKGDQLALDVKDLNLKEEGPHDGKDNGNRAQSFSFNELEAATGNFTADCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFAVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEFMPLGSLENHLLDLRPGSKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGFHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHMKPAKEQNLVAWARPLFRDRKKFPLMVDPLLQGRYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQSSRRSPPSQVMQRDDDEERRLILSTEHVTDRS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0723 416 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0723 416 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Pvu11g0723 416 Gene3D Transferase(Phosphotransferase) domain 1 171 388 - -
Pvu11g0723 416 Pfam Protein tyrosine and serine/threonine kinase 99 308 IPR001245 GO:0004672|GO:0006468
Pvu11g0723 416 MobiDBLite consensus disorder prediction 393 416 - -
Pvu11g0723 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Pvu11g0723 416 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0723 416 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 400 - -
Pvu11g0723 416 MobiDBLite consensus disorder prediction 379 416 - -
Pvu11g0723 416 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Pvu11g0723 416 CDD STKc_IRAK 100 369 - -
Pvu11g0723 416 PANTHER OS07G0668900 PROTEIN 1 400 - -
Pvu11g0723 416 SUPERFAMILY Protein kinase-like (PK-like) 80 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0723 Pvu-Chr11 6181863 6186470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0723 75 373 Glycoside Hydrolase AT3G07070 64.883 6.73e-144 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu11g0723 PK_Tyr_Ser-Thr 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0723 - - gmx:100804000 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1434 5 36775481 36777984 Pvu11g0723 11 6181863 6186470 PCT