Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0721 ATGGAGGCATTTCCGAGGGATCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCGTCGTCTTCTTACTCCAACGAGAAGCCGGTAATCTCGCCATTACGCACTCAATCCACGTGGAAGACGTGGGTCGACTCACGCGTCGAAGAGCAACCGGAGAAGCAGCAACGTGGCGGCGGTCCCGATGAGGTCACCGCCACGTCGTGGATGGCGCTAAAGGATTCCACTCCGCCGCCGCCATCACAAACACTCGCCGCGGTGCTCGGCGAGCCTCCGGCGGAGGTCGGAAACGCCGCGAAGCGCGCCGCGGAATGGGGTCTGGTGCTGAAGACGGACACGGAAACCGGGAAGCCGCAGGGAGTGGCGGTTCAGACCTCCGGCGGGGAGGAGCCGGGCGTGAAGGTGACCGGTGGGTCGAGGAGGGACTCCGGCAACTCCGTTCGAAGCTCCGGCGAGTCCTCCGACGACGGGAGGGAGTACCGGGGAGGAATCCCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCGTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTACGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCCAAGGAGGTCATAGGGAGAAACTGCCGGTTTATGCAGGGAGCAGACACGGATCCGGATGATGTGGCAAAGATAAGGGAGGCCTTACAAACTGGGCAGACCTACTGTGGAAGGTTACTCAATTACAAGAAGGACGGAACACCCTTTTGGAACCTTCTCACTATTGCTCCCATCAAGGACCACGATGGCAGAGTCCTTAAATTTATAGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGAAACAAGGAGAACATGCTACGTCCCAATGGATTACCCGAATCCTTGATTCGATACGATGCTCGTCAGAAAGAGAAGGCAAATAGTTCAGTATCAGAGTTGTTGCTGGCTGTGAGGAGGCCACGGGCACTGAGTGAATCAGGAGGTCGTCCCTTGATCAGAAAGTCAGCATCCGGTGATGATGATCAAGATAAACCAGAAAAGTCATCCAGGAGAAAATCTGAGAGTGTGGCTTCTTTTAGACGTAAATCACATGCAGGAGACAGAACTTCAATGGAGAAAATCACTGAGATACCCGAAAACAAACACAAAACATCTCGTCGCCGTTCCTTCATGGGGTTCATCAGGAAAAATCAGTCCAAGTTTGGAAGCTTCAATGACGAAGCTGTTATTGAGGGTAGCTCTGAGAGTAGTGATGAGGATGGTGAGAGGTCTGGTAGTTTTGATGGCAAAGTACAGAGAAAGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCCAGGCTACCTGATAACCCCATTATCTTTGCATCTGATAGCTTCTTGGAGCTTACGGAGTATAGTCGTGAAGAAATATTGGGAAGAAACTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCTATTGACACTCAAACTGACGTCACTGTGCAACTCATCAATTATACAAAGACTGGTAAAAAGTTCTGGAACTTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAGGTACAGTACTTTATTGGAGTTCAACTTGATGGTAGTCAACACGTGGAGCCTCTTCACAACCGCATTGCAGAAAATACAGCAAAAGAGGGAGAAAAATTGGTAAAAGACACTGCTGAAAATGTCGATGATGCATTGAGAGAACTTCCAGATGCTAATTTGAAACCAGAAGATTTATGGATGAACCATTCAAAAGTGGTTCACCCCAAACCACATAGGAGGGATGAAGCTGCTTGGAAAGCTATTCAGAAGATACTAGAAAGTGGAGAGCAGATAGGCTTGAATCATTTTAAGCCAGTTAAACCTTTGGGATCAGGAGATACCGGCAGTGTCTATCTGGTGGAGCTAGGTGAAACTGGCCAATATTTTGCCATGAAAGCTATGGAGAAGGGCATTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAGATCCTCGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTCCAGACCAAAACACATGTTTGTTTGATAACCGATTATTGTTCTGGTGGAGAACTATTCCTTCTTCTTGACCGACAGCCAGCTAAGGTTCTCAGGGAAGATGCAGTGAGATTTTATGCGGCTGAAGTAGTTGTTGCATTGGAGTATCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTACAAAGCAGTGGACATGTGTCCCTAACAGATTTTGATTTGTCATGTTTGACATCTTGCAAACCACAGCTTCTAGTTCCATCTATAAATGAAAAGAAGAAAGCACAGAAAGGCCACCAACCTCCCATATTCATGGCAGAACCTATGAGAGCATCAAACTCTTTTGTGGGCACAGAAGAGTACATAGCTCCGGAAATTATAACGGGTTCAGGCCATTCTAGTGCTGTGGATTGGTGGGCTCTGGGAATTCTTCTATATGAAATGTTTTTTGGATATACACCATTCAGGGGAAAGACCAGGCAAAGAACATTTACAAATATTCTTCACAAGGACCTTAAATTTCCCAAAAGTAAACAGGTAAGTTTCAGTGCAAAGCAGTTAATGTACCGGTTGCTGAACAGAGACCCCAAAAGCAGATTGGGTTCAAGAGAAGGAGCAAATGAAATTAAGAATCATCCATTCTTTCGGGGTGTCAATTGGGCTCTAGTTCGTTGCACGCCTCCTGAGCTTGATGCTCCTCTCTTCGACACAACTCGAGGAGAAAAGGAAGCCAATTTTGAAGATCAAGTGCAAGAGGAGATGAACGTCTTCTGA 2928 0.4727 MEAFPRDQRGSLEVFNPSSSSYSNEKPVISPLRTQSTWKTWVDSRVEEQPEKQQRGGGPDEVTATSWMALKDSTPPPPSQTLAAVLGEPPAEVGNAAKRAAEWGLVLKTDTETGKPQGVAVQTSGGEEPGVKVTGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPDDVAKIREALQTGQTYCGRLLNYKKDGTPFWNLLTIAPIKDHDGRVLKFIGMQVEVSKHTEGNKENMLRPNGLPESLIRYDARQKEKANSSVSELLLAVRRPRALSESGGRPLIRKSASGDDDQDKPEKSSRRKSESVASFRRKSHAGDRTSMEKITEIPENKHKTSRRRSFMGFIRKNQSKFGSFNDEAVIEGSSESSDEDGERSGSFDGKVQRKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDTQTDVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAENTAKEGEKLVKDTAENVDDALRELPDANLKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGEQIGLNHFKPVKPLGSGDTGSVYLVELGETGQYFAMKAMEKGIMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLVPSINEKKKAQKGHQPPIFMAEPMRASNSFVGTEEYIAPEIITGSGHSSAVDWWALGILLYEMFFGYTPFRGKTRQRTFTNILHKDLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTPPELDAPLFDTTRGEKEANFEDQVQEEMNVF* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0721 975 PANTHER FLIPPASE KINASE 1-RELATED 113 971 - -
Pvu11g0721 975 SMART pac_2 522 564 IPR001610 -
Pvu11g0721 975 SMART pac_2 242 284 IPR001610 -
Pvu11g0721 975 ProSiteProfiles PAC domain profile. 239 293 IPR000700 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 331 394 - -
Pvu11g0721 975 Pfam Protein kinase domain 648 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0721 975 SMART serkin_6 646 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0721 975 ProSiteProfiles PAC domain profile. 519 573 IPR000700 -
Pvu11g0721 975 Gene3D Phosphorylase Kinase; domain 1 645 729 - -
Pvu11g0721 975 CDD PAS 192 281 IPR000014 -
Pvu11g0721 975 ProSiteProfiles PAS repeat profile. 445 518 IPR000014 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 418 441 - -
Pvu11g0721 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 186 278 IPR035965 -
Pvu11g0721 975 Gene3D PAS domain 434 598 - -
Pvu11g0721 975 ProSiteProfiles PAS repeat profile. 165 236 IPR000014 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 12 43 - -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 341 393 - -
Pvu11g0721 975 SUPERFAMILY Protein kinase-like (PK-like) 630 948 IPR011009 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 108 162 - -
Pvu11g0721 975 ProSiteProfiles Protein kinase domain profile. 646 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0721 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Pvu11g0721 975 PANTHER PHOTOTROPIN-1 113 971 - -
Pvu11g0721 975 CDD PAS 460 560 IPR000014 -
Pvu11g0721 975 ProSitePatterns Protein kinases ATP-binding region signature. 652 675 IPR017441 GO:0005524
Pvu11g0721 975 Gene3D Transferase(Phosphotransferase) domain 1 730 943 - -
Pvu11g0721 975 TIGRFAM sensory_box: PAS domain S-box protein 192 286 IPR000014 -
Pvu11g0721 975 TIGRFAM sensory_box: PAS domain S-box protein 470 560 IPR000014 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 1 84 - -
Pvu11g0721 975 Pfam PAS domain 186 282 IPR000014 -
Pvu11g0721 975 Pfam PAS domain 468 560 IPR000014 -
Pvu11g0721 975 CDD STKc_phototropin_like 645 951 - -
Pvu11g0721 975 SMART pas_2 447 516 IPR000014 -
Pvu11g0721 975 SMART pas_2 167 240 IPR000014 -
Pvu11g0721 975 MobiDBLite consensus disorder prediction 423 441 - -
Pvu11g0721 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 461 560 IPR035965 -
Pvu11g0721 975 Gene3D PAS domain 179 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0721 Pvu-Chr11 6155537 6167237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0721 3 975 AGC Kinase Gene Family AT3G45780 69.509 0.0 1315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu11g0721 Pkinase 5.8e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1436 5 36788090 36797906 Pvu11g0721 11 6155537 6167237 PCT