Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0716 ATGTACACACACCGCAACGCCTCCCTCTCACGCGCCGCCGAGTCCCTCGCCAATTTTCTCTCTCCGCAGGACGCATCCACGGCGTCGCCAATGCAGTACGCCGCCGCTCCTCATCCGCAGCACCACCAAGTGGCCCTTGGGGAGTTCGATTCGGAGGCGAGTTCGAATAACACGTACAACAGCTGCGGCAGCGGCTGCACCAGCTACATGGGGTCGCCTAGTTCCCTGGCGAGTTACGAGAGTCGGCGAGTGCAGAGGAGCGTCAGCAGCCACTCGCTGCAGAAGAACAGCGGTGGGCCCCATCACCCCTTTTCTCCTCTCTTCGCTCAGTTGCTTGACTCCCAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTTCATGGAATGCAATATTATCATCATTCAGATAGTCCATTGTCGAGTGAGAGTAGCTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAGCAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGAATCAGAGGGCGATTTGCAAAGAATGACGAAATTGCAATTAACCCTCCAGTTCAGTGGAGCCACATGGGTACTGGAGAGGAAGAGGATGAGGAAGAAGAGAATTGGGCAAATTTCTTTGATTCATTAGTTCCTGCAAATCTTGCTCAGGGGCCTCATGGGAGTAGTTCTTCCTTTGGTGCGTTCTATTAA 789 0.5222 MYTHRNASLSRAAESLANFLSPQDASTASPMQYAAAPHPQHHQVALGEFDSEASSNNTYNSCGSGCTSYMGSPSSLASYESRRVQRSVSSHSLQKNSGGPHHPFSPLFAQLLDSQNGPVRRACSTGDLQRFHGMQYYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKYACRKTLADSRPRIRGRFAKNDEIAINPPVQWSHMGTGEEEDEEEENWANFFDSLVPANLAQGPHGSSSSFGAFY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0716 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 26 262 IPR045281 GO:0009909
Pvu11g0716 262 PANTHER CCT MOTIF PROTEIN 26 262 - -
Pvu11g0716 262 MobiDBLite consensus disorder prediction 77 105 - -
Pvu11g0716 262 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Pvu11g0716 262 Pfam CCT motif 168 208 IPR010402 GO:0005515
Pvu11g0716 262 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0716 Pvu-Chr11 6087810 6090381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0716 157 207 C2C2-CO-like Transcription Factor Family AT5G24930 52.941 4.29e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu11g0716 CCT 3.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0716 - - gmx:102667610 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1440 5 36837529 36839813 Pvu11g0716 11 6087810 6090381 PCT