Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0689 ATGGCGAATTCTAGAATTACCATTGGAAATCCTTCAGAGTTTGGCCAAGCCGATGCATTGCAGGCTGCTCTTGCTGAGTTCATCTCAATGCTAATATTTGTCTTTGCAGGGGAAGGCTCTGGAATGGCATTTAACAAACTGACAAACAATAGTCCAGCAACAGCAGATGGGGTGGTGGCAGCAGCACTGTCTCATGCATTTGCTCTTTTTGTTGCTGTCTCAGTTGGTGCTAACATCTCAGGTGGCCATGTTAACCCTGCAGTCACATTTGGTGCCTTTATTGGTGGCCATATAACCCTCCTCAGAGGCCTTTTGTACTGGATTGCTCAGTTGCTCGGCTCTGTAGTGGCTTGCTTCCTGCTTAAATTTGCCACTGGTGGATCGGAGACATCTGCATTCTCATTATCCCCTGGGGTGGGATCTGCAAATGCACTAGTTTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACAGTGTATGCCACTGCAGTGGACCCAAAGAAGGGTCAACTTGGTATAATTGCTCCAATGGCAATTGGTTTCATTGTGGGTGCAAACATCTTAGCTGGTGGTGCCTTTGATGGTGCATCCATGAACCCAGCAGTTTCCTTTGGGCCCGCTGTTGTTAGTGGGATATGGGCCAACCATTGGGTCTACTGGGTTGGCCCATTAATTGGCTCTGCTATTGCTGCTGTTGTGTACAGCACTTTCTTCATCACTCCAAACTCTTATGAACAGCTATCCGTCGCAGATTATTAG 759 0.469 MANSRITIGNPSEFGQADALQAALAEFISMLIFVFAGEGSGMAFNKLTNNSPATADGVVAAALSHAFALFVAVSVGANISGGHVNPAVTFGAFIGGHITLLRGLLYWIAQLLGSVVACFLLKFATGGSETSAFSLSPGVGSANALVFEIVMTFGLVYTVYATAVDPKKGQLGIIAPMAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSGIWANHWVYWVGPLIGSAIAAVVYSTFFITPNSYEQLSVADY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 3 252 - -
Pvu11g0689 252 PANTHER AQUAPORIN-8 3 252 IPR034294 -
Pvu11g0689 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Pvu11g0689 252 CDD MIP 26 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pvu11g0689 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0689 252 SUPERFAMILY Aquaporin-like 18 243 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0689 Pvu-Chr11 5823762 5825153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0689 1 252 Major Intrinsic Protein MIP AT4G01470 75.794 1.88e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0689 K09873 - gmx:100777419 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1458 5 37002967 37004601 Pvu11g0689 11 5823762 5825153 PCT