Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0687 ATGGAGCTTCATTCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAGCTACCAGGGCGCACTGACAATGAGATCAAGAATTTCTGGAGGACCCACATGAGGAAAAAGAAGGCTCTAGAGAAAAAACGAGCATCATCATCATCTTCATCGTCATCATCATCACCTGTGTCTTCTAGTTCTCTATCTTCACCATCCTCCAGCAATCATGCTGCGGATTCACATGGTTCCAAAGAGGTTGGAGAAGAGAGCTTTTACGACACAGGTGGATGTGATGACATAATGGGGTTGATCGGTGCTGGAGATGAGGAAGGTGGTGAAAAAGGGTACTCTTTGGATGATATATGGGAAGATATTGTTATGTCAGAAGAGAAGGACATGTATGATATTCTGCAACCTGTGTATGAAGGGCACAGTGAAGAGGGATGCAACTTCTCTTGTCCATATCCAATGATTTATTCTCCATCATCATGGGAGTACAATTCTTCTCATCCCTTATGGGTGATGGATGAAGAAGAAAGTAGCAAGATGTTGTTTCCTACATTAACTGACCAATACTATTCCTGCTATGAACAAGGGAATGCATTTCTAACTGGCTAA 600 0.425 MELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKKKALEKKRASSSSSSSSSSPVSSSSLSSPSSSNHAADSHGSKEVGEESFYDTGGCDDIMGLIGAGDEEGGEKGYSLDDIWEDIVMSEEKDMYDILQPVYEGHSEEGCNFSCPYPMIYSPSSWEYNSSHPLWVMDEEESSKMLFPTLTDQYYSCYEQGNAFLTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0687 199 MobiDBLite consensus disorder prediction 45 74 - -
Pvu11g0687 199 MobiDBLite consensus disorder prediction 36 83 - -
Pvu11g0687 199 SMART sant 2 36 IPR001005 -
Pvu11g0687 199 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 180 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pvu11g0687 199 ProSiteProfiles Myb-like domain profile. 1 34 IPR001005 -
Pvu11g0687 199 SUPERFAMILY Homeodomain-like 2 39 IPR009057 -
Pvu11g0687 199 Gene3D - 1 61 - -
Pvu11g0687 199 Pfam Myb-like DNA-binding domain 2 33 IPR001005 -
Pvu11g0687 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 38 IPR017930 -
Pvu11g0687 199 PANTHER TRANSCRIPTION FACTOR MYB48-LIKE ISOFORM X1 1 180 - -
Pvu11g0687 199 CDD SANT 2 34 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0687 Pvu-Chr11 5815669 5817109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0687 1 192 MYB Transcription Factor Family AT3G46130 45.833 5.52e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu11g0687 Myb_DNA-binding 7.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0687 K09422 - gmx:100776886 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0687 11 5815669 5817109 Pvu5g1459 5 37006420 37008178 PCT