Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0668 ATGGCGAATACGCTCATTTCGTCTCCTTCGTTCCTTGGCACGCCGCTTCCCTCGCTCCATCGCCACCACCGCACCACCACCAGGCTTGTCACCAAGGTCCATGTCAGCCTCCACCAAATCCCCCCTATCCACTCCATAAGCCACTCCATTGATTTCGCCGGTATAGCCACCAGAGCTGAAGGCCTTCTTTACACGCTCGCGGACGCTGCGGTTGCAGCGGACCCGGCCGCTTCCACCACTGATGTTGCTGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGGCCGTTCTCAAGGTGTTGAAGGATGGTCTTTCTGCTGTGCATGTGCCTTATACATATGGATTTGCTATCATATTACTCACTGTTATAGTTAAGGCTGCGACACTTCCCTTGACAAAGCAACAGGTTGAATCTACATTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCTATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATCGGCAGGCTGGGGTTAACCCATTGGCAGGCTGTTTACCTACTTTGGCCACAATTCCAGTCTGGATTGGTCTCTACCAAGCATTATCAAATGTGGCCAATGAGGGACTATTAACTGAGGGTTTCTTTTGGATACCCTCTTTGGCTGGTCCTACTACCATTGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTATTTTACCCATTCTTCTTGTTGTTTCTCAATTTGTTTCAATGGAAATCATGAAACCACCTGAGACAGATCCTTCCCAAAAGAATCAACTTCTTGTTTTAAAGTTTCTTCCACTCATGATCGGCTACTTTTCACTATCTGTCCCATCAGGATTAACAATTTACTGGTTTATAAACAATCTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGGGGTGCAAAGCCTGTTGTGACTGAAAATGCCAGTGGGATTATTACTGCAGGACGAGCTAAAAGATCAGATTCGCAACCAGCAAAAGGCGGTGAAAGGTTTAAGCAATTAAAAGAAGGGGAAAAGAAGAACAAGTTAACCAAGGCACTGCCAGTGGAAGATGTTCAGCCACTGGCTTCTGTTTCTGCTTCTGATGATGGCTCGGATATAGAAAGTGACAACAAGGAACAGGAAGTTGCAGAAGGAGCCTATGCTTCTAAAGTTGGTGAAGAGGTTCAAATTAATTCTAGGGACAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1329 0.462 MANTLISSPSFLGTPLPSLHRHHRTTTRLVTKVHVSLHQIPPIHSISHSIDFAGIATRAEGLLYTLADAAVAADPAASTTDVAVQKNGGWFGFISEAMEAVLKVLKDGLSAVHVPYTYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLILPILLVVSQFVSMEIMKPPETDPSQKNQLLVLKFLPLMIGYFSLSVPSGLTIYWFINNLLSTAQQVWLRKLGGAKPVVTENASGIITAGRAKRSDSQPAKGGERFKQLKEGEKKNKLTKALPVEDVQPLASVSASDDGSDIESDNKEQEVAEGAYASKVGEEVQINSRDRRSKRSKRKRAV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0668 442 Pfam 60Kd inner membrane protein 118 331 IPR001708 GO:0016021|GO:0032977
Pvu11g0668 442 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 436 - -
Pvu11g0668 442 MobiDBLite consensus disorder prediction 389 442 - -
Pvu11g0668 442 PANTHER OXA1 1 436 IPR001708 GO:0016021|GO:0032977
Pvu11g0668 442 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 117 330 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0668 Pvu-Chr11 5669436 5675491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0668 31 387 Chloroplast and Mitochondria Gene Families AT2G28800 70.195 3.90e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0668 K03217 - gmx:100817173 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0668 11 5669436 5675491 Pvu11g0668 11 5669436 5675491 ECH