Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0661 ATGCCTTCTAACGCTCTACACTTCTCAACTCAACCACCCCACCTCATGGCCATGGATGACTATGAATGTGATGAGAAGGTCCACGTGGCAGTTGGGAAGTCCCTTAAGAAAGACACCACTTTGATTCAATGGTGTTTCACCCATTTCAGCAGTGCACATATATGCTTACTTCATGTTTATCGACCTTCTACTATGATCCCCACACTATTAGGAAAATTGCCAGCATCCCAAGCTAGTCCTGAAGTCGTGTCTGCTTATAGAATAGAGGAAAGAGAAGACAGCAAGAGGCTTATGGAGAAGTACTTGAGCCTTTGCCGTGCAGCTAAGGTTAAGGTAACTAGTATCATTGGTGAAGCTGATCAAGTTCAGAAAGGGATTGTAGATTTGGTTACTGTGCATAATATCAGGAAGCTTGTTATTGGAGCAATAACCCCAGAAAATTGCATGAAACTCAAAAGGAATTCCAGTAAAGCAAACTTTGCAGTTAAAAATGTTCCTCCATTCTGTGAAATATGGTTTGTCTATAAAGGTAAACACATTTGGACAAGAGAAGCTTCTGAAACTCCTTGTTTTGTGTCTTCCCATGCTCAACCTGAGACTACAACGGCAGAGAGCTTGAGTTGTAGATCATTTCAATATGGTACAAATGAATTATTCCATTCAGAATGTCTTCAATCAAATTCTACAAGGACTACACGAAGTACAGTTCCCAATGAAATTATTGAAGCAGAAGCCACTTTTTCATCCAAATCATCCAGTTGCAATAGTTATTGTTCTCCCCAACATTCAGCTAGTCCGCATATAGATACTCATTCAGAGCCTGAGGAAGAAAAAATAGATAGTCAACTTATTGAAGCCAAAGCAGAAGCTAATGCTGCAACAGACAAGGCCCTTGTGGAGCTGTTCAAGTGCAAAAGGTTGGAATTCAAAGCCATTGAGGCCATTAATAAGGTGGACTTTTTTGAATCTGCCCATGCACATGAAGTAAAGCTCAGAAAAGAGGTTGGGGATGCAATGAGCGCTACAATACAGGAGCAACGGATGTTCTTGGAGGAGAAAGAAGAAATTTCTAGAGAACTGGAAAGGACCACAAGAAGTATTTCCCTTCTAGAAAATTGTGTACATGAAATCAACAGTAAGCTAGATGAAGCTACACATGAACTATCACTAATTCAAGCATCCTCCTCAAACCTGCAGCATGAAAAGCAGGAAATCAGACGACAGAAAATGGAAGCCCTACACTGGCTTGAGCGGTGGAAAAGTTGTGGACATGTTGGAGCAGATCACTGCATCATTGGGTTTTCCGAAGAATTTCCGGAATTGGCAGAATTTTCATTATCAGATCTTCAAAACGCAACGTGCAATTTTTCTGAGAGTTTCAAAGCTATGGAGGGTGGATATGGTTCTATTTATAAGGGAGAAATGTTGGGTAGAACAGTTGCTATAAGGAAGCTCCATTCACACAACATGCAAGGATCAGCAGAGTTTCATCAAGAGGTTCGAGTTCTTGGTAGTATCCAGCACCCTAATCTGGTTACTTTGCTTGGTGTATGCCCTGAAGCCTGGTCATTTGTATATGAATACTATCCCAATGGAAGTCTTCAAGATTATCTATCCCGAAAAGGAAGTCTTCTCCCTTTGACATGGACTATCCGAGTACGATGGATTTCTGAAATTGCTAGAGCTCTCTGCTTCCTACATTCTTCCAGACCTGAAACTATTATTCACGGTGGTCTGACGCTTGAAACTGTCCTTCTTGACACTGGACTTAGTTGCAAGATATGTGATTTTGGGTTCAGCAGGCTAGTGAAAGAGGAGTCACTTTCTCTTCCTTGTTTTCACTTAAGCACTGAGCCAAAGGGTTCTTTTTCGTATATAGATCCTGAGCTTCAGAGAACTGGAGTACTAACACCTAAGTCTGACGTATACTCTTTTGGACTCATCATTCTGCAACTCCTCACTGGTAGGACTCCAGTTGGATTAGCTGGTGAAGTGCGCAGAGCAATTTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGAATTCCACAGGGGCAACACGATTGGCTGAACTGGGATTGCAATGCTGCCAACTGAACAGTAGAGACAGACCAGAGTTAACACCCTCTCTAGTGAGGGAATTGAAGCAGTTGTACGTTTCAGAAGAGCGACCAGTGCCACCTTTTTTCTTGTGTCCAATCTTTCAGGAAATAATGCATGATCCTCAAGTTGCAGCAGATGGATTTACTTATGAAAGGAAGGCCATAAGAGAATGGCTGGAATATGGGCACGAAACTTCTCCTATGACTAATTTAAAATTGAGTTACCTGCATCTCACTCACAATAATGCACTTCGATTTGCTATTCAAGACTGGCTTTGCAAATCTTGA 2403 0.4157 MPSNALHFSTQPPHLMAMDDYECDEKVHVAVGKSLKKDTTLIQWCFTHFSSAHICLLHVYRPSTMIPTLLGKLPASQASPEVVSAYRIEEREDSKRLMEKYLSLCRAAKVKVTSIIGEADQVQKGIVDLVTVHNIRKLVIGAITPENCMKLKRNSSKANFAVKNVPPFCEIWFVYKGKHIWTREASETPCFVSSHAQPETTTAESLSCRSFQYGTNELFHSECLQSNSTRTTRSTVPNEIIEAEATFSSKSSSCNSYCSPQHSASPHIDTHSEPEEEKIDSQLIEAKAEANAATDKALVELFKCKRLEFKAIEAINKVDFFESAHAHEVKLRKEVGDAMSATIQEQRMFLEEKEEISRELERTTRSISLLENCVHEINSKLDEATHELSLIQASSSNLQHEKQEIRRQKMEALHWLERWKSCGHVGADHCIIGFSEEFPELAEFSLSDLQNATCNFSESFKAMEGGYGSIYKGEMLGRTVAIRKLHSHNMQGSAEFHQEVRVLGSIQHPNLVTLLGVCPEAWSFVYEYYPNGSLQDYLSRKGSLLPLTWTIRVRWISEIARALCFLHSSRPETIIHGGLTLETVLLDTGLSCKICDFGFSRLVKEESLSLPCFHLSTEPKGSFSYIDPELQRTGVLTPKSDVYSFGLIILQLLTGRTPVGLAGEVRRAISCGKLSSILDSSAGEWNSTGATRLAELGLQCCQLNSRDRPELTPSLVRELKQLYVSEERPVPPFFLCPIFQEIMHDPQVAADGFTYERKAIREWLEYGHETSPMTNLKLSYLHLTHNNALRFAIQDWLCKS* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0661 800 PANTHER OS10G0100500 PROTEIN 21 799 - -
Pvu11g0661 800 Coils Coil 391 411 - -
Pvu11g0661 800 ProSiteProfiles Protein kinase domain profile. 456 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0661 800 ProSiteProfiles U-box domain profile. 729 800 IPR003613 GO:0004842|GO:0016567
Pvu11g0661 800 Gene3D Phosphorylase Kinase; domain 1 433 528 - -
Pvu11g0661 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 800 IPR013083 -
Pvu11g0661 800 CDD RING-Ubox_WDSUB1_like 734 775 - -
Pvu11g0661 800 Pfam Protein tyrosine and serine/threonine kinase 464 712 IPR001245 GO:0004672|GO:0006468
Pvu11g0661 800 Gene3D HUPs 22 142 IPR014729 -
Pvu11g0661 800 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 46 142 - -
Pvu11g0661 800 CDD STK_N 26 177 - -
Pvu11g0661 800 Pfam U-box domain 730 799 IPR003613 GO:0004842|GO:0016567
Pvu11g0661 800 Gene3D Transferase(Phosphotransferase) domain 1 529 729 - -
Pvu11g0661 800 PANTHER OS02G0152300 PROTEIN 21 799 - -
Pvu11g0661 800 SMART Ubox_2 733 796 IPR003613 GO:0004842|GO:0016567
Pvu11g0661 800 SUPERFAMILY Protein kinase-like (PK-like) 439 717 IPR011009 -
Pvu11g0661 800 SUPERFAMILY RING/U-box 727 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0661 Pvu-Chr11 5585784 5592897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0661 24 797 U-box Gene Family AT2G45910 35.411 3.20e-160 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu11g0661 PK_Tyr_Ser-Thr 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0661 - - gmx:100799032 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1483 5 37233777 37238162 Pvu11g0661 11 5585784 5592897 PCT